FFCP PHASE1:Hg19::chr11:77530594..77530600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:77530594..77530600,+ | |||
|description=CAGE_peak_at_chr11:77530594..77530600,+ | |description=CAGE_peak_at_chr11:77530594..77530600,+ | ||
|id=chr11:77530594..77530600,+ | |id=chr11:77530594..77530600,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.12e-16!172;CL:0000566!3.12e-16!172;CL:0000738!3.44e-16!140;CL:0000988!5.56e-16!182;CL:0000542!1.34e-15!53;CL:0000051!1.34e-15!53;CL:0002087!2.24e-15!119;CL:0000838!4.37e-15!52;CL:0002032!7.44e-15!165;CL:0000837!7.44e-15!165;CL:0002031!3.57e-14!124;CL:0000084!1.21e-09!25;CL:0000827!1.21e-09!25;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18;CL:0000624!1.67e-07!6 | |ontology_enrichment_celltype=CL:0000037!3.12e-16!172;CL:0000566!3.12e-16!172;CL:0000738!3.44e-16!140;CL:0000988!5.56e-16!182;CL:0000542!1.34e-15!53;CL:0000051!1.34e-15!53;CL:0002087!2.24e-15!119;CL:0000838!4.37e-15!52;CL:0002032!7.44e-15!165;CL:0000837!7.44e-15!165;CL:0002031!3.57e-14!124;CL:0000084!1.21e-09!25;CL:0000827!1.21e-09!25;CL:0000791!1.66e-07!18;CL:0000789!1.66e-07!18;CL:0002420!1.66e-07!18;CL:0002419!1.66e-07!18;CL:0000790!1.66e-07!18;CL:0000624!1.67e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002127;5.41e-15;1!CL:0000911;5.41e-15;1!CL:0000814;5.41e-15;1!CL:0000946;1.40e-14;1!CL:0000786;1.40e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.42e-15,1;CL:0000914,5.42e-15,1;CL:0000911,5.42e-15,1;CL:0000814,5.42e-15,1;CL:0002042,5.42e-15,1;CL:0002039,5.42e-15,1;CL:0002040,5.42e-15,1;CL:0002041,5.42e-15,1;CL:0000946,1.61e-14,1;CL:0000786,1.61e-14,1;CL:0000980,1.61e-14,1;CL:0000893,3.82e-08,2;CL:0002489,3.82e-08,2;CL:0000809,3.82e-08,2;CL:0000808,3.82e-08,2;CL:0000894,3.82e-08,2;CL:0000806,3.82e-08,2;CL:0000807,3.82e-08,2;CL:0000805,3.82e-08,2;CL:0002425,3.82e-08,2;CL:0000785,6.58e-08,2;CL:0000955,6.58e-08,2;CL:0000818,6.58e-08,2;CL:0000954,6.58e-08,2;CL:0000816,6.58e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.81e-08;2!CL:0000954;6.14e-08;2 | |||
|ontology_enrichment_disease=DOID:162!5.07e-13!235;DOID:14566!3.09e-12!239;DOID:0060058!5.24e-10!10;DOID:0050687!6.73e-08!143;DOID:0050686!7.39e-08!137;DOID:305!4.64e-07!106;DOID:2531!6.27e-07!51;DOID:0060083!6.27e-07!51 | |ontology_enrichment_disease=DOID:162!5.07e-13!235;DOID:14566!3.09e-12!239;DOID:0060058!5.24e-10!10;DOID:0050687!6.73e-08!143;DOID:0050686!7.39e-08!137;DOID:305!4.64e-07!106;DOID:2531!6.27e-07!51;DOID:0060083!6.27e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:3112;1.40e-14;1!DOID:1240;2.51e-07;39!DOID:8692;4.92e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.84e-14,1;DOID:1240,2.01e-08,39;DOID:8692,5.23e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.14e-08;2!UBERON:0005058;6.14e-08;2!UBERON:0009113;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.72e-14,4;UBERON:0005058,1.72e-14,4;UBERON:0009113,1.72e-14,4;UBERON:0003295,1.72e-14,4;UBERON:0005562,1.72e-14,4;UBERON:0009722,1.47e-11,11;UBERON:0007690,1.47e-11,11;UBERON:0003351,5.68e-10,6;UBERON:0004177,1.13e-08,7;UBERON:0005057,1.13e-08,7;UBERON:0008814,2.86e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.229240217243854,0.164201178899891,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.387336002901508,0.568676929949686,0.293600439334847,0,0,0.434021741431704,0,0.32389366601898,0,0,0.755751887377619,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0.75374599577023,0,0.65156653411535,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0.393419540227666,0.786021525498329,0.616804496998528,0,0.651844533267181,0,0,0.111410456885174,0.883817722424512,0.443067789167242,0,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,1.30216690771284,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,2.57795831185113,0.985153801009636,0.646882724578552,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0.577076851905779,0.213425530045242,0.318852545457645,0,0,1.05836791361941,0,0,1.14117339516596,0,0,0.338583555603207,0,0,1.27753871307098,1.03051603426729,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.557216921387392,0.284136146806413,0,0,0,0,0,0.556543525114529,0.16480387422676,1.47787785689595,0,0,0,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0.583209226766509,0.520874984799877,0,0,0,0.110579259931225,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0.113942055847001,0.23056390438806,0.179515288819544,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0.816164040795739,0.424059214301822,0,0,0,0,0,0.123563938946503,0,0,0,0,0.729819156862664,0,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0.288180834308212,0,1.02956998717179,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.423366660328922,0,0,0.321506296930038,0.412618309791701,0,0,0,0.0607495566580247,0,0,0,0.316801009558219,0,0.767660789277781,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0.249960815924213,0.303298235083296,0,0.705797459094515,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.389720617678777,0,0,0,0,0.211312123358627,0.59996218756479,0.320075189082423,0.172214979660816,0,0.920529751259204,0,0,0.255788742607303,0,0.471797825567689,1.74735421107222,0,0.637724760305049,0.247871528518004,0,0,0.394308725006267,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,0.808679663052368,0,0,0.397832444232549,0,0.20170506870352,0,0,1.14640342257068,0.443568258651136,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,1.15233987555779,0,0,0,0.354581522651905,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,1.1598144313382,0,0,3.58111395290463,0,0.45178432815584,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,1.42771842880473,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| ||
|short_description=p@chr11:77530594..77530600,+ | |short_description=p@chr11:77530594..77530600,+ | ||
}} | }} |
Latest revision as of 02:45, 24 July 2015
Short description: | p@chr11:77530594..77530600, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:77530594..77530600, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.42e-15 | 1 |
immature NK T cell | 5.42e-15 | 1 |
effector T cell | 5.42e-15 | 1 |
mature NK T cell | 5.42e-15 | 1 |
immature NK T cell stage IV | 5.42e-15 | 1 |
immature NK T cell stage I | 5.42e-15 | 1 |
immature NK T cell stage II | 5.42e-15 | 1 |
immature NK T cell stage III | 5.42e-15 | 1 |
antibody secreting cell | 1.61e-14 | 1 |
plasma cell | 1.61e-14 | 1 |
plasmablast | 1.61e-14 | 1 |
thymocyte | 3.82e-08 | 2 |
double negative thymocyte | 3.82e-08 | 2 |
double-positive, alpha-beta thymocyte | 3.82e-08 | 2 |
DN4 thymocyte | 3.82e-08 | 2 |
DN1 thymic pro-T cell | 3.82e-08 | 2 |
DN2 thymocyte | 3.82e-08 | 2 |
DN3 thymocyte | 3.82e-08 | 2 |
immature single positive thymocyte | 3.82e-08 | 2 |
early T lineage precursor | 3.82e-08 | 2 |
mature B cell | 6.58e-08 | 2 |
pre-B-II cell | 6.58e-08 | 2 |
transitional stage B cell | 6.58e-08 | 2 |
small pre-B-II cell | 6.58e-08 | 2 |
immature B cell | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.72e-14 | 4 |
hemolymphoid system gland | 1.72e-14 | 4 |
thymic region | 1.72e-14 | 4 |
pharyngeal gland | 1.72e-14 | 4 |
thymus primordium | 1.72e-14 | 4 |
entire pharyngeal arch endoderm | 1.47e-11 | 11 |
early pharyngeal endoderm | 1.47e-11 | 11 |
pharyngeal epithelium | 5.68e-10 | 6 |
hemopoietic organ | 1.13e-08 | 7 |
immune organ | 1.13e-08 | 7 |
pharyngeal arch system | 2.86e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.84e-14 | 1 |
leukemia | 2.01e-08 | 39 |
myeloid leukemia | 5.23e-07 | 31 |