FFCP PHASE1:Hg19::chr11:9879819..9879831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:9879819..9879831,- | |||
|coexpression_cluster_id=C136 | |coexpression_cluster_id=C136 | ||
|description=CAGE_peak_at_chr11:9879819..9879831,- | |description=CAGE_peak_at_chr11:9879819..9879831,- | ||
|id=chr11:9879819..9879831,- | |id=chr11:9879819..9879831,- | ||
|ontology_enrichment_celltype=CL:0002253!9.73e-07!2 | |ontology_enrichment_celltype=CL:0002253!9.73e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002616;5.97e-34;1!CL:0002590;2.74e-12;3!CL:0000138;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,5.05e-34,1;CL:0002590,3.24e-12,3;CL:0000058,8.02e-07,6;CL:0000138,8.02e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;5.97e-34;1!DOID:4549;5.97e-34;1!DOID:5861;5.97e-34;1!DOID:6496;5.97e-34;1!DOID:1115;1.31e-07;20!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.61e-34,1;DOID:4549,3.61e-34,1;DOID:5861,3.61e-34,1;DOID:6496,3.61e-34,1;DOID:1115,1.25e-07,20;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001155!3.46e-07!9 | |ontology_enrichment_uberon=UBERON:0001155!3.46e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;9.86e-18;2!UBERON:0002418;2.74e-12;3!UBERON:0004755;2.74e-12;3!UBERON:0000945;6.78e-08;5!UBERON:0010039;6.78e-08;5!UBERON:0005284;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.07e-18,2;UBERON:0002418,2.31e-12,3;UBERON:0004755,2.31e-12,3;UBERON:0005284,7.49e-08,5 | |||
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|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0.309157587715317,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.751941714077915,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,1.116475108079,0,0,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05038869441323,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0.432777279484182,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,1.85337866052151,0,0,0,0,0,0,0,0,0,1.14536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09234565662625,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr11:9879819..9879831,- | |short_description=p@chr11:9879819..9879831,- | ||
}} | }} |
Latest revision as of 03:51, 24 July 2015
Short description: | p@chr11:9879819..9879831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:9879819..9879831, - |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 5.05e-34 | 1 |
smooth muscle cell of the brain vasculature | 3.24e-12 | 3 |
chondroblast | 8.02e-07 | 6 |
chondrocyte | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 9.07e-18 | 2 |
cartilage tissue | 2.31e-12 | 3 |
skeletal tissue | 2.31e-12 | 3 |
brain vasculature | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.61e-34 | 1 |
extraosseous chondrosarcoma | 3.61e-34 | 1 |
myxoid chondrosarcoma | 3.61e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 3.61e-34 | 1 |
sarcoma | 1.25e-07 | 20 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |