FFCP PHASE1:Hg19::chr12:124873905..124873916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:124873905..124873916,- | |||
|coexpression_cluster_id=C2195 | |coexpression_cluster_id=C2195 | ||
|description=CAGE_peak_at_chr12:124873905..124873916,- | |description=CAGE_peak_at_chr12:124873905..124873916,- | ||
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|ontology_enrichment_celltype=CL:0002057!4.76e-17!42;CL:0000766!1.12e-15!76;CL:0002009!1.57e-14!65;CL:0000860!2.06e-14!45;CL:0002194!8.85e-14!63;CL:0000576!8.85e-14!63;CL:0000040!8.85e-14!63;CL:0000559!8.85e-14!63;CL:0000557!1.28e-12!71;CL:0000839!2.15e-11!70 | |ontology_enrichment_celltype=CL:0002057!4.76e-17!42;CL:0000766!1.12e-15!76;CL:0002009!1.57e-14!65;CL:0000860!2.06e-14!45;CL:0002194!8.85e-14!63;CL:0000576!8.85e-14!63;CL:0000040!8.85e-14!63;CL:0000559!8.85e-14!63;CL:0000557!1.28e-12!71;CL:0000839!2.15e-11!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-27;33!CL:0002057;2.44e-27;33!CL:0000473;6.08e-21;39!CL:0000234;6.08e-21;39!CL:0000576;5.28e-15;48!CL:0000766;1.03e-10;69!CL:0000094;1.27e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;2.44e-27;33!CL:0002057;2.44e-27;33!CL:0000473;6.08e-21;39!CL:0000234;6.08e-21;39!CL:0000576;5.28e-15;48!CL:0000766;1.03e-10;69!CL:0000094;1.27e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.51e-27,42;CL:0002057,1.51e-27,42;CL:0000473,5.66e-26,48;CL:0000234,5.66e-26,48;CL:0000766,1.17e-25,72;CL:0002009,2.36e-23,61;CL:0002194,6.23e-23,59;CL:0000576,6.23e-23,59;CL:0000040,6.23e-23,59;CL:0000559,6.23e-23,59;CL:0000557,4.46e-20,67;CL:0000839,3.86e-19,66;CL:0000763,3.44e-13,108;CL:0000049,3.44e-13,108;CL:0000738,1.63e-09,136;CL:0000094,1.53e-07,8;CL:0002087,2.17e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.75e-21;42 | |ontology_enrichment_development_v019=CL:0002057;6.75e-21;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.96e-14!216;UBERON:0000467!2.53e-10!625;UBERON:0000480!3.97e-10!626;UBERON:0002371!6.17e-10!80;UBERON:0000926!9.64e-10!448;UBERON:0004120!9.64e-10!448;UBERON:0006603!9.64e-10!448;UBERON:0001474!1.87e-09!86;UBERON:0000062!2.95e-09!511;UBERON:0000468!4.95e-09!659;UBERON:0000025!2.94e-08!194;UBERON:0000923!3.66e-08!604;UBERON:0005291!3.66e-08!604;UBERON:0006598!3.66e-08!604;UBERON:0002532!3.66e-08!604;UBERON:0004765!3.92e-08!101;UBERON:0001434!3.92e-08!101;UBERON:0002050!5.43e-08!605;UBERON:0005423!5.43e-08!605;UBERON:0000922!1.50e-07!612;UBERON:0003914!1.74e-07!118;UBERON:0002204!2.73e-07!167 | |ontology_enrichment_uberon=UBERON:0003081!6.96e-14!216;UBERON:0000467!2.53e-10!625;UBERON:0000480!3.97e-10!626;UBERON:0002371!6.17e-10!80;UBERON:0000926!9.64e-10!448;UBERON:0004120!9.64e-10!448;UBERON:0006603!9.64e-10!448;UBERON:0001474!1.87e-09!86;UBERON:0000062!2.95e-09!511;UBERON:0000468!4.95e-09!659;UBERON:0000025!2.94e-08!194;UBERON:0000923!3.66e-08!604;UBERON:0005291!3.66e-08!604;UBERON:0006598!3.66e-08!604;UBERON:0002532!3.66e-08!604;UBERON:0004765!3.92e-08!101;UBERON:0001434!3.92e-08!101;UBERON:0002050!5.43e-08!605;UBERON:0005423!5.43e-08!605;UBERON:0000922!1.50e-07!612;UBERON:0003914!1.74e-07!118;UBERON:0002204!2.73e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.73e-19,203;UBERON:0002371,2.12e-17,76;UBERON:0001474,2.36e-16,82;UBERON:0004765,9.58e-14,90;UBERON:0002405,9.16e-13,93;UBERON:0001434,1.74e-12,100;UBERON:0002390,2.40e-12,98;UBERON:0003061,2.40e-12,98;UBERON:0002193,8.82e-11,108;UBERON:0002204,5.26e-10,167;UBERON:0000926,1.77e-09,315;UBERON:0004120,1.77e-09,315;UBERON:0006603,1.77e-09,315;UBERON:0001637,6.02e-07,42;UBERON:0003509,6.02e-07,42;UBERON:0004572,6.02e-07,42 | |||
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| ||
|short_description=p@chr12:124873905..124873916,- | |short_description=p@chr12:124873905..124873916,- | ||
}} | }} |
Latest revision as of 06:23, 24 July 2015
Short description: | p@chr12:124873905..124873916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:124873905..124873916, - |
Coexpression cluster: | C2195_liposarcoma_Smooth_Fibroblast_CD14_giant_Hepatic_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.51e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-27 | 42 |
defensive cell | 5.66e-26 | 48 |
phagocyte | 5.66e-26 | 48 |
myeloid leukocyte | 1.17e-25 | 72 |
macrophage dendritic cell progenitor | 2.36e-23 | 61 |
monopoietic cell | 6.23e-23 | 59 |
monocyte | 6.23e-23 | 59 |
monoblast | 6.23e-23 | 59 |
promonocyte | 6.23e-23 | 59 |
granulocyte monocyte progenitor cell | 4.46e-20 | 67 |
myeloid lineage restricted progenitor cell | 3.86e-19 | 66 |
myeloid cell | 3.44e-13 | 108 |
common myeloid progenitor | 3.44e-13 | 108 |
leukocyte | 1.63e-09 | 136 |
granulocyte | 1.53e-07 | 8 |
nongranular leukocyte | 2.17e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.73e-19 | 203 |
bone marrow | 2.12e-17 | 76 |
bone element | 2.36e-16 | 82 |
skeletal element | 9.58e-14 | 90 |
immune system | 9.16e-13 | 93 |
skeletal system | 1.74e-12 | 100 |
hematopoietic system | 2.40e-12 | 98 |
blood island | 2.40e-12 | 98 |
hemolymphoid system | 8.82e-11 | 108 |
musculoskeletal system | 5.26e-10 | 167 |
mesoderm | 1.77e-09 | 315 |
mesoderm-derived structure | 1.77e-09 | 315 |
presumptive mesoderm | 1.77e-09 | 315 |
artery | 6.02e-07 | 42 |
arterial blood vessel | 6.02e-07 | 42 |
arterial system | 6.02e-07 | 42 |