FFCP PHASE1:Hg19::chr12:130786785..130786827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:130786785..130786827,- | |||
|coexpression_cluster_id=C321 | |coexpression_cluster_id=C321 | ||
|description=CAGE_peak_at_chr12:130786785..130786827,- | |description=CAGE_peak_at_chr12:130786785..130786827,- | ||
|id=chr12:130786785..130786827,- | |id=chr12:130786785..130786827,- | ||
|ontology_enrichment_celltype=CL:0000214!6.76e-18!3;CL:0000153!7.48e-07!9;CL:0000447!7.48e-07!9 | |ontology_enrichment_celltype=CL:0000214!6.76e-18!3;CL:0000153!7.48e-07!9;CL:0000447!7.48e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000214;2.39e-66;3!CL:0000153;2.62e-23;9!CL:0000447;2.62e-23;9!CL:0000327;1.22e-14;15!CL:0000499;1.52e-08;28!CL:0002078;2.32e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,2.39e-66,3;CL:0000153,2.62e-23,9;CL:0000447,2.62e-23,9;CL:0000327,1.22e-14,15;CL:0000499,1.52e-08,28;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1115;2.29e-11;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,2.29e-11,20 | |||
|ontology_enrichment_uberon=UBERON:0002426!2.42e-50!1;UBERON:0003831!2.42e-50!1;UBERON:0003898!2.42e-50!1;UBERON:0004830!2.42e-50!1;UBERON:0001774!2.42e-50!1;UBERON:0003830!2.42e-50!1;UBERON:0005175!2.42e-50!1;UBERON:0003897!2.42e-50!1;UBERON:0001103!2.42e-50!1;UBERON:0010084!2.42e-50!1;UBERON:0002370!8.47e-50!4;UBERON:0005058!8.47e-50!4;UBERON:0009113!8.47e-50!4;UBERON:0003295!8.47e-50!4;UBERON:0005562!8.47e-50!4;UBERON:0003351!1.17e-33!6;UBERON:0004177!4.86e-29!7;UBERON:0001630!5.56e-26!2;UBERON:0005090!5.56e-26!2;UBERON:0000974!1.04e-20!10;UBERON:0003408!1.04e-20!10;UBERON:0001042!1.04e-20!10;UBERON:0009145!1.04e-20!10;UBERON:0006562!6.17e-19!11;UBERON:0009722!6.17e-19!11;UBERON:0007690!6.17e-19!11;UBERON:0006915!6.76e-18!3;UBERON:0002018!6.76e-18!3;UBERON:0002217!6.76e-18!3;UBERON:0007616!6.76e-18!3;UBERON:0008814!3.36e-14!15;UBERON:0001557!1.91e-11!19;UBERON:0004905!2.66e-11!5;UBERON:0000982!2.66e-11!5;UBERON:0004770!2.66e-11!5;UBERON:0005057!1.20e-08!26;UBERON:0004807!4.21e-08!28;UBERON:0001004!4.68e-07!72 | |ontology_enrichment_uberon=UBERON:0002426!2.42e-50!1;UBERON:0003831!2.42e-50!1;UBERON:0003898!2.42e-50!1;UBERON:0004830!2.42e-50!1;UBERON:0001774!2.42e-50!1;UBERON:0003830!2.42e-50!1;UBERON:0005175!2.42e-50!1;UBERON:0003897!2.42e-50!1;UBERON:0001103!2.42e-50!1;UBERON:0010084!2.42e-50!1;UBERON:0002370!8.47e-50!4;UBERON:0005058!8.47e-50!4;UBERON:0009113!8.47e-50!4;UBERON:0003295!8.47e-50!4;UBERON:0005562!8.47e-50!4;UBERON:0003351!1.17e-33!6;UBERON:0004177!4.86e-29!7;UBERON:0001630!5.56e-26!2;UBERON:0005090!5.56e-26!2;UBERON:0000974!1.04e-20!10;UBERON:0003408!1.04e-20!10;UBERON:0001042!1.04e-20!10;UBERON:0009145!1.04e-20!10;UBERON:0006562!6.17e-19!11;UBERON:0009722!6.17e-19!11;UBERON:0007690!6.17e-19!11;UBERON:0006915!6.76e-18!3;UBERON:0002018!6.76e-18!3;UBERON:0002217!6.76e-18!3;UBERON:0007616!6.76e-18!3;UBERON:0008814!3.36e-14!15;UBERON:0001557!1.91e-11!19;UBERON:0004905!2.66e-11!5;UBERON:0000982!2.66e-11!5;UBERON:0004770!2.66e-11!5;UBERON:0005057!1.20e-08!26;UBERON:0004807!4.21e-08!28;UBERON:0001004!4.68e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.39e-66;3!UBERON:0007616;2.39e-66;3!UBERON:0002217;2.39e-66;3!UBERON:0002018;2.39e-66;3!UBERON:0004905;5.22e-26;8!UBERON:0000982;5.22e-26;8!UBERON:0004770;5.22e-26;8!UBERON:0004457;2.62e-23;9!UBERON:0000042;2.62e-23;9!UBERON:0000486;6.76e-18;12!UBERON:0006914;2.15e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.39e-66,3;UBERON:0007616,2.39e-66,3;UBERON:0002217,2.39e-66,3;UBERON:0002018,2.39e-66,3;UBERON:0004905,5.22e-26,8;UBERON:0000982,5.22e-26,8;UBERON:0004770,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0006914,2.15e-09,25 | |||
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|short_description=p@chr12:130786785..130786827,- | |short_description=p@chr12:130786785..130786827,- | ||
}} | }} |
Latest revision as of 06:45, 24 July 2015
Short description: | p@chr12:130786785..130786827, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:130786785..130786827, - |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 2.39e-66 | 3 |
GAG secreting cell | 2.62e-23 | 9 |
carbohydrate secreting cell | 2.62e-23 | 9 |
extracellular matrix secreting cell | 1.22e-14 | 15 |
stromal cell | 1.52e-08 | 28 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.39e-66 | 3 |
layer of synovial tissue | 2.39e-66 | 3 |
synovial joint | 2.39e-66 | 3 |
synovial membrane of synovial joint | 2.39e-66 | 3 |
articulation | 5.22e-26 | 8 |
skeletal joint | 5.22e-26 | 8 |
articular system | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
squamous epithelium | 2.15e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 2.29e-11 | 20 |