FFCP PHASE1:Hg19::chr12:15885722..15885733,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:15885722..15885733,-
|short_description=p@chr12:15885722..15885733,-
|description=CAGE_peak_at_chr12:15885722..15885733,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:15885722..15885733,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr12:15885722..15885733,- | |||
|id=chr12:15885722..15885733,- | |||
|ontology_enrichment_celltype=CL:1000497!3.68e-07!18;CL:0002518!3.68e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000946;2.41e-14;1!CL:0000786;2.41e-14;1!CL:0000945;8.12e-14;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.75e-14,1;CL:0000786,2.75e-14,1;CL:0000980,2.75e-14,1;CL:0000945,8.34e-14,24;CL:0000826,8.34e-14,24;CL:0000785,8.60e-08,2;CL:0000955,8.60e-08,2;CL:0000818,8.60e-08,2;CL:0000954,8.60e-08,2;CL:0000816,8.60e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.57e-22;10!UBERON:0007687;8.57e-22;10!UBERON:0006242;1.72e-14;1!UBERON:0003104;8.98e-11;31!CL:0000954;8.04e-08;2!UBERON:0007297;8.04e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;3.56e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.56e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!2.62e-10!55;UBERON:0005173!2.62e-10!55;UBERON:0000489!2.97e-10!32;UBERON:0002113!3.55e-10!27;UBERON:0003918!3.55e-10!27;UBERON:0005095!3.55e-10!27;UBERON:0007687!3.55e-10!27;UBERON:0002417!5.47e-09!61;UBERON:0000916!5.47e-09!61;UBERON:0005177!3.97e-08!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.41e-14;1!UBERON:0002426;3.14e-14;1!UBERON:0003831;3.14e-14;1!UBERON:0003898;3.14e-14;1!UBERON:0004830;3.14e-14;1!UBERON:0003830;3.14e-14;1!UBERON:0005175;3.14e-14;1!UBERON:0001774;3.14e-14;1!UBERON:0001103;3.14e-14;1!UBERON:0002113;3.01e-09;24!UBERON:0011143;3.01e-09;24!UBERON:0005090;9.19e-08;2!UBERON:0001630;9.19e-08;2!UBERON:0000489;1.09e-07;29!UBERON:0006554;1.95e-07;30!UBERON:0001008;1.95e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.11e-14,1;UBERON:0002426,3.15e-14,1;UBERON:0003831,3.15e-14,1;UBERON:0003898,3.15e-14,1;UBERON:0004830,3.15e-14,1;UBERON:0003830,3.15e-14,1;UBERON:0005175,3.15e-14,1;UBERON:0001774,3.15e-14,1;UBERON:0001103,3.15e-14,1;UBERON:0010084,3.15e-14,1;UBERON:0002113,7.50e-13,26;UBERON:0003918,7.50e-13,26;UBERON:0011143,7.50e-13,26;UBERON:0005095,7.50e-13,26;UBERON:0007687,7.50e-13,26;UBERON:0000489,8.96e-11,31;UBERON:0005172,1.36e-08,54;UBERON:0005173,1.36e-08,54;UBERON:0005090,9.19e-08,2;UBERON:0001630,9.19e-08,2;UBERON:0002417,1.07e-07,60;UBERON:0000916,1.07e-07,60;UBERON:0005177,1.29e-07,101;UBERON:0006554,4.44e-07,47;UBERON:0001008,6.27e-07,48;UBERON:0009569,8.74e-07,112 | |||
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| ||
|short_description=p@chr12:15885722..15885733,- | |||
}} | }} |
Latest revision as of 07:11, 24 July 2015
Short description: | p@chr12:15885722..15885733, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:15885722..15885733, - |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.75e-14 | 1 |
plasma cell | 2.75e-14 | 1 |
plasmablast | 2.75e-14 | 1 |
lymphocyte of B lineage | 8.34e-14 | 24 |
pro-B cell | 8.34e-14 | 24 |
mature B cell | 8.60e-08 | 2 |
pre-B-II cell | 8.60e-08 | 2 |
transitional stage B cell | 8.60e-08 | 2 |
small pre-B-II cell | 8.60e-08 | 2 |
immature B cell | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.11e-14 | 1 |
chest muscle | 3.15e-14 | 1 |
respiratory system muscle | 3.15e-14 | 1 |
skeletal muscle of trunk | 3.15e-14 | 1 |
respiratory system skeletal muscle | 3.15e-14 | 1 |
thoracic segment muscle | 3.15e-14 | 1 |
chest organ | 3.15e-14 | 1 |
muscle of trunk | 3.15e-14 | 1 |
diaphragm | 3.15e-14 | 1 |
future diaphragm | 3.15e-14 | 1 |
kidney | 7.50e-13 | 26 |
kidney mesenchyme | 7.50e-13 | 26 |
upper urinary tract | 7.50e-13 | 26 |
kidney rudiment | 7.50e-13 | 26 |
kidney field | 7.50e-13 | 26 |
cavitated compound organ | 8.96e-11 | 31 |
abdomen element | 1.36e-08 | 54 |
abdominal segment element | 1.36e-08 | 54 |
muscle structure | 9.19e-08 | 2 |
muscle organ | 9.19e-08 | 2 |
abdominal segment of trunk | 1.07e-07 | 60 |
abdomen | 1.07e-07 | 60 |
trunk region element | 1.29e-07 | 101 |
urinary system structure | 4.44e-07 | 47 |
renal system | 6.27e-07 | 48 |
subdivision of trunk | 8.74e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.56e-08 | 2 |