FFCP PHASE1:Hg19::chr12:40619482..40619487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:40619482..40619487,- | |||
|coexpression_cluster_id=C308 | |||
|description=CAGE_peak_at_chr12:40619482..40619487,- | |description=CAGE_peak_at_chr12:40619482..40619487,- | ||
|id=chr12:40619482..40619487,- | |id=chr12:40619482..40619487,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.96e-10;29!UBERON:0001041;5.96e-10;30!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!2.29e-15!9;UBERON:0007245!2.29e-15!9;UBERON:0010009!2.29e-15!9;UBERON:0010011!2.29e-15!9;UBERON:0000454!2.29e-15!9;UBERON:0002780!2.74e-15!41;UBERON:0001890!2.74e-15!41;UBERON:0006240!2.74e-15!41;UBERON:0002791!4.16e-15!33;UBERON:0003080!6.64e-15!42;UBERON:0001893!1.20e-14!34;UBERON:0007023!1.93e-14!115;UBERON:0001869!4.98e-12!32;UBERON:0009663!1.69e-11!7;UBERON:0002020!2.67e-11!34;UBERON:0003528!2.67e-11!34;UBERON:0001049!1.01e-10!57;UBERON:0005068!1.01e-10!57;UBERON:0006241!1.01e-10!57;UBERON:0007135!1.01e-10!57;UBERON:0002171!1.80e-10!1;UBERON:0006518!1.80e-10!1;UBERON:0008949!1.80e-10!1;UBERON:0000101!1.80e-10!1;UBERON:0002167!1.80e-10!1;UBERON:0002616!2.53e-10!59;UBERON:0003056!5.98e-10!61;UBERON:0002581!6.91e-10!1;UBERON:0002336!8.99e-10!1;UBERON:0001018!8.99e-10!1;UBERON:0002473!8.99e-10!1;UBERON:0005340!8.99e-10!1;UBERON:0002316!8.99e-10!1;UBERON:0003544!8.99e-10!1;UBERON:0001020!8.99e-10!1;UBERON:0005970!8.99e-10!1;UBERON:0002437!8.99e-10!1;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0000369!2.15e-09!4;UBERON:0002435!2.15e-09!4;UBERON:0000204!2.15e-09!4;UBERON:0010082!2.15e-09!4;UBERON:0002308!4.64e-09!9;UBERON:0000125!4.64e-09!9;UBERON:0001017!1.01e-08!82;UBERON:0000955!1.58e-08!69;UBERON:0006238!1.58e-08!69;UBERON:0003075!2.27e-08!86;UBERON:0007284!2.27e-08!86;UBERON:0005743!2.94e-08!86;UBERON:0002346!6.17e-08!90;UBERON:0000349!9.88e-08!5;UBERON:0000073!2.37e-07!94;UBERON:0001016!2.37e-07!94;UBERON:0001950!8.16e-07!20;UBERON:0000200!9.69e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.39e-66;1!UBERON:0006518;2.39e-66;1!UBERON:0008949;2.39e-66;1!UBERON:0000101;2.39e-66;1!UBERON:0002167;2.39e-66;1!UBERON:0002048;3.77e-13;22!UBERON:0000117;3.77e-13;22!UBERON:0000171;3.77e-13;22!UBERON:0000170;3.77e-13;22!UBERON:0005178;1.20e-08;34!UBERON:0002224;1.20e-08;34!UBERON:0005181;5.42e-08;35!UBERON:0000065;2.44e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.39e-66,1;UBERON:0006518,2.39e-66,1;UBERON:0008949,2.39e-66,1;UBERON:0000101,2.39e-66,1;UBERON:0002167,2.39e-66,1;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0005153,2.82e-08,37;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0005177,6.45e-07,101;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p@chr12:40619482..40619487,- | |short_description=p@chr12:40619482..40619487,- | ||
}} | }} |
Latest revision as of 08:22, 24 July 2015
Short description: | p@chr12:40619482..40619487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:40619482..40619487, - |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.39e-66 | 1 |
right lung lobe | 2.39e-66 | 1 |
lower lobe of lung | 2.39e-66 | 1 |
lobe of lung | 2.39e-66 | 1 |
right lung | 2.39e-66 | 1 |
lung | 3.77e-13 | 22 |
respiratory tube | 3.77e-13 | 22 |
respiration organ | 3.77e-13 | 22 |
pair of lungs | 3.77e-13 | 22 |
lung primordium | 3.77e-13 | 22 |
lung bud | 3.77e-13 | 22 |
thoracic cavity element | 6.54e-09 | 34 |
thoracic cavity | 6.54e-09 | 34 |
thoracic segment organ | 1.09e-08 | 35 |
epithelial bud | 2.82e-08 | 37 |
respiratory primordium | 4.36e-08 | 38 |
endoderm of foregut | 4.36e-08 | 38 |
trunk region element | 6.45e-07 | 101 |
epithelial fold | 9.72e-07 | 47 |