FFCP PHASE1:Hg19::chr12:47596373..47596378,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:47596373..47596378,-
|short_description=p@chr12:47596373..47596378,-
|description=CAGE_peak_at_chr12:47596373..47596378,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:47596373..47596378,- | |||
|description=CAGE_peak_at_chr12:47596373..47596378,- | |||
|id=chr12:47596373..47596378,- | |||
|ontology_enrichment_celltype=CL:0000542!6.19e-24!53;CL:0000051!6.19e-24!53;CL:0000791!6.20e-23!18;CL:0000789!6.20e-23!18;CL:0002420!6.20e-23!18;CL:0002419!6.20e-23!18;CL:0000790!6.20e-23!18;CL:0000838!1.35e-22!52;CL:0000084!1.46e-19!25;CL:0000827!1.46e-19!25;CL:0002087!1.17e-18!119;CL:0000738!4.19e-14!140;CL:0000625!5.11e-14!11;CL:0002031!3.96e-13!124;CL:0000037!2.59e-12!172;CL:0000566!2.59e-12!172;CL:0000988!5.57e-11!182;CL:0002032!8.37e-11!165;CL:0000837!8.37e-11!165;CL:0000624!5.53e-09!6;CL:0000623!2.48e-07!3;CL:0000842!2.48e-07!3;CL:0000825!2.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.95e-12;3!CL:0000791;1.93e-11;18!CL:0000789;1.93e-11;18!CL:0002419;1.93e-11;18!CL:0000895;1.55e-09;1!CL:0000084;3.43e-08;25!CL:0000625;2.41e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.78e-12,3;CL:0000825,7.78e-12,3;CL:0000791,1.99e-11,18;CL:0000789,1.99e-11,18;CL:0002420,1.99e-11,18;CL:0002419,1.99e-11,18;CL:0000790,1.99e-11,18;CL:0000810,2.26e-09,1;CL:0000895,2.26e-09,1;CL:0002436,2.26e-09,1;CL:0002427,2.26e-09,1;CL:0002428,2.26e-09,1;CL:0002429,2.26e-09,1;CL:0002433,2.26e-09,1;CL:0002431,2.26e-09,1;CL:0002432,2.26e-09,1;CL:0000084,3.51e-08,25;CL:0000827,3.51e-08,25;CL:0000625,2.14e-07,11;CL:0000838,4.95e-07,52;CL:0000542,6.94e-07,53;CL:0000051,6.94e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.93e-11;18!CL:0002427;1.55e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.51e-12!15;UBERON:0000179!1.51e-12!15;UBERON:0000463!1.51e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.55e-09;1!UBERON:0000178;3.59e-09;15!UBERON:0000179;3.59e-09;15!UBERON:0000463;3.59e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.91e-10,1;UBERON:0000178,4.13e-09,15;UBERON:0000179,4.13e-09,15;UBERON:0000463,4.13e-09,15 | |||
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| ||
|short_description=p@chr12:47596373..47596378,- | |||
}} | }} |
Latest revision as of 08:45, 24 July 2015
Short description: | p@chr12:47596373..47596378, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47596373..47596378, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.78e-12 | 3 |
pro-NK cell | 7.78e-12 | 3 |
mature alpha-beta T cell | 1.99e-11 | 18 |
alpha-beta T cell | 1.99e-11 | 18 |
immature T cell | 1.99e-11 | 18 |
mature T cell | 1.99e-11 | 18 |
immature alpha-beta T cell | 1.99e-11 | 18 |
CD4-positive, alpha-beta thymocyte | 2.26e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.26e-09 | 1 |
mature CD4 single-positive thymocyte | 2.26e-09 | 1 |
resting double-positive thymocyte | 2.26e-09 | 1 |
double-positive blast | 2.26e-09 | 1 |
CD69-positive double-positive thymocyte | 2.26e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.26e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.26e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.26e-09 | 1 |
T cell | 3.51e-08 | 25 |
pro-T cell | 3.51e-08 | 25 |
CD8-positive, alpha-beta T cell | 2.14e-07 | 11 |
lymphoid lineage restricted progenitor cell | 4.95e-07 | 52 |
lymphocyte | 6.94e-07 | 53 |
common lymphoid progenitor | 6.94e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.91e-10 | 1 |
blood | 4.13e-09 | 15 |
haemolymphatic fluid | 4.13e-09 | 15 |
organism substance | 4.13e-09 | 15 |