FFCP PHASE1:Hg19::chr12:52345448..52345532,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=91 | |EntrezGene=entrezgene:91 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=172 | |HGNC=HGNC:172 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P36896,F5H5Q2 | |UniProt=uniprot:P36896,uniprot:F5H5Q2 | ||
|association_with_transcript=0bp_to_ENST00000257963,ENST00000415850,ENST00000426655,ENST00000536420,ENST00000541224,NM_004302,NM_020328,uc001rzl.2,uc001rzm.2,uc001rzn.2,uc010snn.1_5end | |association_with_transcript=0bp_to_ENST00000257963,ENST00000415850,ENST00000426655,ENST00000536420,ENST00000541224,NM_004302,NM_020328,uc001rzl.2,uc001rzm.2,uc001rzn.2,uc010snn.1_5end | ||
|cluster_id=chr12:52345448..52345532,+ | |||
|description=CAGE_peak_1_at_ACVR1B_5end | |description=CAGE_peak_1_at_ACVR1B_5end | ||
|id=chr12:52345448..52345532,+ | |id=chr12:52345448..52345532,+ | ||
Revision as of 09:25, 24 July 2015
| Short description: | p1@ACVR1B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ACVR1B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000257963, ENST00000415850, ENST00000426655, ENST00000536420, ENST00000541224, NM_004302, NM_020328, uc001rzl.2, uc001rzm.2, uc001rzn.2, uc010snn.1_5end |
| EntrezGene: | 91 |
| HGNC: | 172 |
| UniProt: | P36896F5H5Q2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ACVR1B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 4.01e-11 | 42 |
| CD14-positive, CD16-negative classical monocyte | 4.01e-11 | 42 |
| defensive cell | 1.13e-10 | 48 |
| phagocyte | 1.13e-10 | 48 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| embryo | 1.21e-23 | 592 |
| adult organism | 2.47e-22 | 114 |
| developing anatomical structure | 9.21e-22 | 581 |
| germ layer | 3.08e-20 | 560 |
| germ layer / neural crest | 3.08e-20 | 560 |
| embryonic tissue | 3.08e-20 | 560 |
| presumptive structure | 3.08e-20 | 560 |
| germ layer / neural crest derived structure | 3.08e-20 | 560 |
| epiblast (generic) | 3.08e-20 | 560 |
| embryonic structure | 1.59e-19 | 564 |
Showing 1 to 10 of 48 entries
