FFCP PHASE1:Hg19::chr12:52913754..52913774,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52913754..52913774,+
|short_description=p@chr12:52913754..52913774,+
|description=CAGE_peak_at_chr12:52913754..52913774,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52913754..52913774,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52913754..52913774,+ | |||
|id=chr12:52913754..52913774,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.41e-24!43;CL:0002368!8.16e-18!13;CL:0002159!1.76e-17!13;CL:0000066!6.40e-17!254;CL:0000223!1.35e-15!59;CL:0000076!3.11e-11!62;CL:0002251!3.32e-11!21;CL:0002202!4.39e-10!9;CL:0002632!4.39e-10!9;CL:0000244!5.88e-10!4;CL:0000731!5.88e-10!4;CL:0002077!1.47e-09!33;CL:0002328!9.34e-09!3;CL:0000068!1.57e-08!3;CL:0000069!1.57e-08!3;CL:0000307!1.57e-08!3;CL:0000377!1.57e-08!3;CL:0000622!3.75e-08!5;CL:0000349!4.80e-08!3;CL:0002577!4.80e-08!3;CL:0000362!8.41e-08!8;CL:0002166!9.97e-08!3;CL:0000240!1.80e-07!6;CL:0000311!1.80e-07!6;CL:0000079!1.80e-07!6;CL:0000237!1.80e-07!6;CL:0000036!1.80e-07!6;CL:0000357!1.80e-07!6;CL:0000114!1.80e-07!6;CL:0000154!8.91e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.33e-31;13!CL:0002076;4.53e-22;42!CL:0002159;1.50e-18;14!CL:0002202;3.31e-17;9!CL:0002632;3.31e-17;9!CL:0002328;4.00e-14;3!CL:0000307;9.13e-14;3!CL:0002577;6.14e-13;3!CL:0000240;2.01e-12;6!CL:0000311;2.01e-12;6!CL:0000079;2.01e-12;6!CL:0000237;2.01e-12;6!CL:0002327;1.60e-10;4!CL:0000575;7.56e-10;2!CL:0002077;1.27e-09;34!CL:0000312;8.89e-09;5!CL:0000622;2.97e-08;5!CL:0000362;5.23e-08;9!CL:0002251;3.48e-07;20!CL:0000154;6.07e-07;6!CL:0002623;8.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.77e-31,13;CL:0002076,1.51e-28,42;CL:0000066,1.12e-19,253;CL:0000223,1.78e-19,58;CL:0002159,1.32e-18,14;CL:0002202,3.22e-17,9;CL:0002632,3.22e-17,9;CL:0002328,3.75e-14,3;CL:0000068,9.34e-14,3;CL:0000069,9.34e-14,3;CL:0000307,9.34e-14,3;CL:0000377,9.34e-14,3;CL:0002577,6.54e-13,3;CL:0000240,2.04e-12,6;CL:0000311,2.04e-12,6;CL:0000079,2.04e-12,6;CL:0000237,2.04e-12,6;CL:0000036,2.04e-12,6;CL:0000357,2.04e-12,6;CL:0000114,2.04e-12,6;CL:0002327,1.34e-10,4;CL:0002077,1.35e-10,34;CL:0000575,6.93e-10,2;CL:0000312,8.78e-09,5;CL:0000622,2.97e-08,5;CL:0000362,5.04e-08,9;CL:0002321,1.82e-07,250;CL:0000076,2.02e-07,63;CL:0002251,3.65e-07,20;CL:0000154,6.07e-07,6;CL:0002623,8.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;9.13e-14;3!CL:0000357;2.01e-12;6!CL:0000114;2.01e-12;6!CL:0000223;4.51e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!4.43e-17!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.63e-13!72;UBERON:0000974!1.74e-12!10;UBERON:0000365!1.59e-11!5;UBERON:0003729!2.44e-11!5;UBERON:0004119!2.88e-11!169;UBERON:0000925!2.88e-11!169;UBERON:0006595!2.88e-11!169;UBERON:0000161!5.15e-11!35;UBERON:0000166!5.75e-11!21;UBERON:0007196!4.11e-10!14;UBERON:0001558!4.11e-10!14;UBERON:0003102!7.54e-10!95;UBERON:0000065!1.12e-09!53;UBERON:0005910!1.54e-09!6;UBERON:0000165!2.43e-09!28;UBERON:0000930!2.43e-09!28;UBERON:0003343!5.95e-09!4;UBERON:0004785!5.95e-09!4;UBERON:0004815!9.34e-09!3;UBERON:0002031!9.34e-09!3;UBERON:0006562!1.37e-08!11;UBERON:0003126!2.34e-08!7;UBERON:0001005!2.34e-08!7;UBERON:0000344!4.49e-08!12;UBERON:0001723!2.08e-07!3;UBERON:0001033!2.08e-07!3;UBERON:0010056!2.08e-07!3;UBERON:0005631!2.56e-07!14;UBERON:0000158!2.56e-07!14;UBERON:0001042!3.86e-07!10;UBERON:0009145!3.86e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.00e-14;3!UBERON:0002031;4.00e-14;3!UBERON:0001911;1.60e-10;4!UBERON:0007196;4.68e-10;15!UBERON:0001558;4.68e-10;15!UBERON:0001987;7.97e-10;4!UBERON:0002185;1.21e-08;5!UBERON:0005178;5.79e-07;34!UBERON:0002224;5.79e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.75e-14,3;UBERON:0002031,3.75e-14,3;UBERON:0004119,1.64e-11,160;UBERON:0000925,1.64e-11,160;UBERON:0006595,1.64e-11,160;UBERON:0001004,7.11e-11,74;UBERON:0001911,1.34e-10,4;UBERON:0005333,1.34e-10,4;UBERON:0008425,1.34e-10,4;UBERON:0005311,1.34e-10,4;UBERON:0007196,4.60e-10,15;UBERON:0001558,4.60e-10,15;UBERON:0001987,8.35e-10,4;UBERON:0004340,8.35e-10,4;UBERON:0003102,9.19e-10,99;UBERON:0000065,1.02e-08,54;UBERON:0002185,1.17e-08,5;UBERON:0005157,1.96e-07,47;UBERON:0000033,6.07e-07,56;UBERON:0005178,6.83e-07,34;UBERON:0002224,6.83e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,2.11013582582763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6301608161418,12.3494426699083,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64295288292542,41.1570731490717,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.8775256867763,8.99214026060957,32.1692711717219,18.0547468059133,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.503946384596579,3.26082723657489,3.85101647622248,7.55648240136301,18.7857512790953,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63753085735511,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80709058424599,6.53775021444864,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,3.8015530533025,2.88285101047659,1.02090169995667,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,3.46399605811843,12.0654409596442,6.53345909167936,0,0.86101074534246,5.05414427002877,18.1806362950037,0.229723400206959,0,0,0,0,0,0,0,0,0,0,6.37104561550682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.921482106297696,0,0,0,0,1.47787785689595,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43794448313449,0,0,0,0,0,0,0,0,0,0,0,0,5.57694977114413,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,2.03676934625681,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,22.4741240691508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.10243328470236,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.353909170043221,5.50285795565037,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18040410407592,8.70664233179145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.952257725854961,0.193766729508018,0.124149428591716,0,0,0,2.39488422686657,3.08009970976753,0.202056159043763,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,4.69281884806909,0,3.25516942652591,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,2.11013582582763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6301608161418,12.3494426699083,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64295288292542,41.1570731490717,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.8775256867763,8.99214026060957,32.1692711717219,18.0547468059133,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.503946384596579,3.26082723657489,3.85101647622248,7.55648240136301,18.7857512790953,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63753085735511,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80709058424599,6.53775021444864,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,3.8015530533025,2.88285101047659,1.02090169995667,2.4277867405332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,3.46399605811843,12.0654409596442,6.53345909167936,0,0.86101074534246,5.05414427002877,18.1806362950037,0.229723400206959,0,0,0,0,0,0,0,0,0,0,6.37104561550682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.921482106297696,0,0,0,0,1.47787785689595,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43794448313449,0,0,0,0,0,0,0,0,0,0,0,0,5.57694977114413,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,2.03676934625681,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,22.4741240691508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.10243328470236,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.353909170043221,5.50285795565037,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18040410407592,8.70664233179145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.952257725854961,0.193766729508018,0.124149428591716,0,0,0,2.39488422686657,3.08009970976753,0.202056159043763,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,4.69281884806909,0,3.25516942652591,0,0.201273793591026,0 | ||
|short_description=p@chr12:52913754..52913774,+ | |||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913754..52913774, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913754..52913774, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.75e-14 | 3 |
epithelium of bronchus | 3.75e-14 | 3 |
endoderm-derived structure | 1.64e-11 | 160 |
endoderm | 1.64e-11 | 160 |
presumptive endoderm | 1.64e-11 | 160 |
respiratory system | 7.11e-11 | 74 |
mammary gland | 1.34e-10 | 4 |
mammary bud | 1.34e-10 | 4 |
mammary ridge | 1.34e-10 | 4 |
mammary placode | 1.34e-10 | 4 |
tracheobronchial tree | 4.60e-10 | 15 |
lower respiratory tract | 4.60e-10 | 15 |
placenta | 8.35e-10 | 4 |
allantois | 8.35e-10 | 4 |
surface structure | 9.19e-10 | 99 |
respiratory tract | 1.02e-08 | 54 |
bronchus | 1.17e-08 | 5 |
epithelial fold | 1.96e-07 | 47 |
head | 6.07e-07 | 56 |
thoracic cavity element | 6.83e-07 | 34 |
thoracic cavity | 6.83e-07 | 34 |