FFCP PHASE1:Hg19::chr12:53267915..53267928,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53267915..53267928,- | |||
|coexpression_cluster_id=C82 | |coexpression_cluster_id=C82 | ||
|description=CAGE_peak_at_chr12:53267915..53267928,- | |description=CAGE_peak_at_chr12:53267915..53267928,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.31e-38!42;CL:0000860!1.41e-37!45;CL:0002009!1.95e-27!65;CL:0000557!1.01e-25!71;CL:0000766!4.05e-25!76;CL:0002194!5.57e-25!63;CL:0000576!5.57e-25!63;CL:0000040!5.57e-25!63;CL:0000559!5.57e-25!63;CL:0000839!6.62e-23!70;CL:0000738!4.05e-16!140;CL:0000763!1.66e-15!112;CL:0000049!1.66e-15!112;CL:0002031!2.16e-14!124;CL:0002087!1.21e-13!119;CL:0000037!9.50e-11!172;CL:0000566!9.50e-11!172;CL:0002032!3.30e-10!165;CL:0000837!3.30e-10!165;CL:0000988!1.69e-09!182;CL:0002393!2.18e-09!9;CL:0002397!2.18e-09!9;CL:0000134!5.61e-07!358;CL:0000767!6.65e-07!3;CL:0000063!9.74e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.31e-38!42;CL:0000860!1.41e-37!45;CL:0002009!1.95e-27!65;CL:0000557!1.01e-25!71;CL:0000766!4.05e-25!76;CL:0002194!5.57e-25!63;CL:0000576!5.57e-25!63;CL:0000040!5.57e-25!63;CL:0000559!5.57e-25!63;CL:0000839!6.62e-23!70;CL:0000738!4.05e-16!140;CL:0000763!1.66e-15!112;CL:0000049!1.66e-15!112;CL:0002031!2.16e-14!124;CL:0002087!1.21e-13!119;CL:0000037!9.50e-11!172;CL:0000566!9.50e-11!172;CL:0002032!3.30e-10!165;CL:0000837!3.30e-10!165;CL:0000988!1.69e-09!182;CL:0002393!2.18e-09!9;CL:0002397!2.18e-09!9;CL:0000134!5.61e-07!358;CL:0000767!6.65e-07!3;CL:0000063!9.74e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.95e-32;33!CL:0002057;2.95e-32;33!CL:0000473;9.32e-24;39!CL:0000234;9.32e-24;39!CL:0000576;9.59e-22;48!CL:0000766;1.87e-18;69!CL:0002393;1.36e-13;6!CL:0002397;1.36e-13;6!CL:0000767;1.32e-12;3!CL:0002087;1.20e-07;104!CL:0000763;2.60e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.95e-32;33!CL:0002057;2.95e-32;33!CL:0000473;9.32e-24;39!CL:0000234;9.32e-24;39!CL:0000576;9.59e-22;48!CL:0000766;1.87e-18;69!CL:0002393;1.36e-13;6!CL:0002397;1.36e-13;6!CL:0000767;1.32e-12;3!CL:0002087;1.20e-07;104!CL:0000763;2.60e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.05e-42,42;CL:0002057,8.05e-42,42;CL:0000473,2.80e-36,48;CL:0000234,2.80e-36,48;CL:0002009,1.61e-31,61;CL:0000766,4.11e-30,72;CL:0002194,1.63e-28,59;CL:0000576,1.63e-28,59;CL:0000040,1.63e-28,59;CL:0000559,1.63e-28,59;CL:0000557,1.69e-28,67;CL:0000839,2.88e-25,66;CL:0000763,9.16e-22,108;CL:0000049,9.16e-22,108;CL:0000738,7.84e-19,136;CL:0002087,1.49e-15,115;CL:0002031,8.49e-15,120;CL:0000037,1.19e-14,168;CL:0000988,9.62e-14,177;CL:0002032,1.27e-13,161;CL:0000837,1.27e-13,161;CL:0000767,1.29e-12,3;CL:0002393,3.18e-09,9;CL:0002397,3.18e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-29;42 | |ontology_enrichment_development_v019=CL:0002057;1.40e-29;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.43e-21!80;UBERON:0001474!1.64e-20!86;UBERON:0004765!7.21e-17!101;UBERON:0001434!7.21e-17!101;UBERON:0002390!1.04e-16!102;UBERON:0003061!1.04e-16!102;UBERON:0002405!3.19e-15!115;UBERON:0002193!3.66e-15!112;UBERON:0003081!3.01e-08!216;UBERON:0002204!7.06e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!1.43e-21!80;UBERON:0001474!1.64e-20!86;UBERON:0004765!7.21e-17!101;UBERON:0001434!7.21e-17!101;UBERON:0002390!1.04e-16!102;UBERON:0003061!1.04e-16!102;UBERON:0002405!3.19e-15!115;UBERON:0002193!3.66e-15!112;UBERON:0003081!3.01e-08!216;UBERON:0002204!7.06e-08!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.58e-25,76;UBERON:0001474,7.50e-23,82;UBERON:0002390,2.42e-21,98;UBERON:0003061,2.42e-21,98;UBERON:0004765,1.34e-20,90;UBERON:0002405,7.48e-20,93;UBERON:0002193,4.10e-19,108;UBERON:0001434,2.77e-18,100;UBERON:0003081,1.73e-11,203;UBERON:0002204,7.27e-10,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,0.383829398097213,11.1467608787575,0,0,0,0,0,0,10.5259127621057,4.21143339687298,3.47217393145363,0,0,0,0.436194716338694,1.88937971844405,2.42584061187816,0.929716147622738,0.822335776043652,1.23882548358041,0,0.512321413058201,0.709446689665756,0.689491361473237,2.5819387343353,5.41705946377367,0.564727018627814,0.272906150057846,1.79778787556068,1.22433556948361,0.962787081228281,1.27867425159808,0,1.19678194572979,0.426224750532694,0,0,0,1.25624332628372,0.521482918420201,2.38907729175628,0,0,1.26584954976354,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0.296964680832639,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0.0870592065804026,0,0,0,0,0.164230914106418,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.756154618816195,0.15543720058278,0.295710299979268,0.477890301491107,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0.363697318405119,0.966695013382396,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.870866991587845,0,0.202056159043763,0.0717222053926763,0,0,0.213454691755431,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,0.383829398097213,11.1467608787575,0,0,0,0,0,0,10.5259127621057,4.21143339687298,3.47217393145363,0,0,0,0.436194716338694,1.88937971844405,2.42584061187816,0.929716147622738,0.822335776043652,1.23882548358041,0,0.512321413058201,0.709446689665756,0.689491361473237,2.5819387343353,5.41705946377367,0.564727018627814,0.272906150057846,1.79778787556068,1.22433556948361,0.962787081228281,1.27867425159808,0,1.19678194572979,0.426224750532694,0,0,0,1.25624332628372,0.521482918420201,2.38907729175628,0,0,1.26584954976354,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0.447792613514241,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0.296964680832639,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0.0870592065804026,0,0,0,0,0.164230914106418,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.756154618816195,0.15543720058278,0.295710299979268,0.477890301491107,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0.363697318405119,0.966695013382396,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.870866991587845,0,0.202056159043763,0.0717222053926763,0,0,0.213454691755431,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr12:53267915..53267928,- | |short_description=p@chr12:53267915..53267928,- | ||
}} | }} |
Latest revision as of 09:42, 24 July 2015
Short description: | p@chr12:53267915..53267928, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53267915..53267928, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.05e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.05e-42 | 42 |
defensive cell | 2.80e-36 | 48 |
phagocyte | 2.80e-36 | 48 |
macrophage dendritic cell progenitor | 1.61e-31 | 61 |
myeloid leukocyte | 4.11e-30 | 72 |
monopoietic cell | 1.63e-28 | 59 |
monocyte | 1.63e-28 | 59 |
monoblast | 1.63e-28 | 59 |
promonocyte | 1.63e-28 | 59 |
granulocyte monocyte progenitor cell | 1.69e-28 | 67 |
myeloid lineage restricted progenitor cell | 2.88e-25 | 66 |
myeloid cell | 9.16e-22 | 108 |
common myeloid progenitor | 9.16e-22 | 108 |
leukocyte | 7.84e-19 | 136 |
nongranular leukocyte | 1.49e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 8.49e-15 | 120 |
hematopoietic stem cell | 1.19e-14 | 168 |
hematopoietic cell | 9.62e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-13 | 161 |
basophil | 1.29e-12 | 3 |
intermediate monocyte | 3.18e-09 | 9 |
CD14-positive, CD16-positive monocyte | 3.18e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.58e-25 | 76 |
bone element | 7.50e-23 | 82 |
hematopoietic system | 2.42e-21 | 98 |
blood island | 2.42e-21 | 98 |
skeletal element | 1.34e-20 | 90 |
immune system | 7.48e-20 | 93 |
hemolymphoid system | 4.10e-19 | 108 |
skeletal system | 2.77e-18 | 100 |
lateral plate mesoderm | 1.73e-11 | 203 |
musculoskeletal system | 7.27e-10 | 167 |