FFCP PHASE1:Hg19::chr12:6100031..6100035,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:6100031..6100035,-
|short_description=p@chr12:6100031..6100035,-
|description=CAGE_peak_at_chr12:6100031..6100035,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:6100031..6100035,- | |||
|description=CAGE_peak_at_chr12:6100031..6100035,- | |||
|id=chr12:6100031..6100035,- | |||
|ontology_enrichment_celltype=CL:0002139!1.31e-19!24;CL:0000115!1.99e-14!35;CL:0000071!8.97e-13!18;CL:0002546!8.97e-13!18;CL:0002078!4.73e-10!44;CL:0002543!4.89e-09!6;CL:0005020!7.81e-09!6;CL:0002138!7.81e-09!6;CL:0005022!7.81e-09!6;CL:1000413!6.13e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.06e-15;24!CL:0002138;2.15e-14;6!CL:0000115;2.35e-12;36!CL:0002543;4.50e-08;6!CL:0002078;6.54e-08;45!CL:0002618;1.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.58e-16,24;CL:0000115,6.44e-15,36;CL:0005020,1.62e-14,6;CL:0002138,1.62e-14,6;CL:0005022,1.62e-14,6;CL:0002078,1.66e-11,45;CL:0000213,1.86e-08,58;CL:0000215,1.86e-08,58;CL:0002543,3.27e-08,6;CL:0002618,7.53e-08,3;CL:0000071,9.44e-07,18;CL:0002546,9.44e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;2.15e-14;6!UBERON:0005062;3.84e-12;4!UBERON:0007284;3.84e-12;4!UBERON:0003056;1.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-51!115;UBERON:0004111!1.81e-13!241;UBERON:0001049!5.38e-13!57;UBERON:0005068!5.38e-13!57;UBERON:0006241!5.38e-13!57;UBERON:0007135!5.38e-13!57;UBERON:0001986!8.97e-13!18;UBERON:0004638!8.97e-13!18;UBERON:0004852!8.97e-13!18;UBERON:0000477!5.89e-12!286;UBERON:0003080!3.02e-11!42;UBERON:0002020!3.72e-11!34;UBERON:0003528!3.72e-11!34;UBERON:0002616!3.86e-11!59;UBERON:0001893!5.06e-11!34;UBERON:0001017!1.20e-10!82;UBERON:0005743!1.42e-10!86;UBERON:0000955!1.47e-10!69;UBERON:0006238!1.47e-10!69;UBERON:0002780!1.89e-10!41;UBERON:0001890!1.89e-10!41;UBERON:0006240!1.89e-10!41;UBERON:0002791!1.97e-10!33;UBERON:0000025!3.84e-10!194;UBERON:0000073!4.35e-10!94;UBERON:0001016!4.35e-10!94;UBERON:0002619!7.36e-10!22;UBERON:0003075!9.70e-10!86;UBERON:0007284!9.70e-10!86;UBERON:0000487!1.11e-09!22;UBERON:0001869!1.61e-09!32;UBERON:0002346!1.68e-09!90;UBERON:0000956!3.08e-08!25;UBERON:0000203!3.08e-08!25;UBERON:0001950!3.72e-08!20;UBERON:0006914!4.89e-08!25;UBERON:0000153!8.87e-08!129;UBERON:0007811!8.87e-08!129;UBERON:0001638!2.38e-07!9;UBERON:0003920!2.38e-07!9;UBERON:0004582!2.38e-07!9;UBERON:0002298!3.39e-07!8;UBERON:0000055!5.04e-07!69;UBERON:0000033!5.25e-07!123;UBERON:0003915!6.13e-07!9;UBERON:0004700!6.13e-07!9;UBERON:0001917!6.13e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;5.12e-16;3!UBERON:0000946;5.12e-16;3!UBERON:0005090;1.21e-11;2!UBERON:0001630;1.21e-11;2!UBERON:0002133;1.70e-11;2!UBERON:0002081;3.87e-11;2!UBERON:0001473;8.13e-11;8!UBERON:0004536;8.13e-11;8!UBERON:0006558;8.13e-11;8!UBERON:0002465;1.16e-08;10!UBERON:0004151;1.05e-07;3!UBERON:0007100;8.70e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,6.30e-16,3;UBERON:0009751,6.30e-16,3;UBERON:0000946,6.30e-16,3;UBERON:0002523,6.30e-16,3;UBERON:0005983,6.30e-16,3;UBERON:0002165,6.30e-16,3;UBERON:0002062,6.30e-16,3;UBERON:0007280,6.30e-16,3;UBERON:0007023,3.19e-13,114;UBERON:0000055,1.03e-11,68;UBERON:0005090,1.18e-11,2;UBERON:0001630,1.18e-11,2;UBERON:0002133,1.38e-11,2;UBERON:0002081,3.16e-11,2;UBERON:0010227,3.16e-11,2;UBERON:0001473,6.58e-11,8;UBERON:0004536,6.58e-11,8;UBERON:0006558,6.58e-11,8;UBERON:0002049,7.79e-10,78;UBERON:0007798,7.79e-10,78;UBERON:0001009,2.17e-09,112;UBERON:0002465,9.80e-09,10;UBERON:0004535,1.98e-08,109;UBERON:0004151,9.23e-08,3;UBERON:0004111,1.48e-07,240;UBERON:0004797,4.35e-07,7;UBERON:0004638,9.44e-07,18;UBERON:0001986,9.44e-07,18;UBERON:0004852,9.44e-07,18 | |||
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| ||
|short_description=p@chr12:6100031..6100035,- | |||
}} | }} |
Latest revision as of 11:04, 24 July 2015
Short description: | p@chr12:6100031..6100035, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6100031..6100035, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.58e-16 | 24 |
endothelial cell | 6.44e-15 | 36 |
lymphangioblast | 1.62e-14 | 6 |
endothelial cell of lymphatic vessel | 1.62e-14 | 6 |
vascular lymphangioblast | 1.62e-14 | 6 |
meso-epithelial cell | 1.66e-11 | 45 |
lining cell | 1.86e-08 | 58 |
barrier cell | 1.86e-08 | 58 |
vein endothelial cell | 3.27e-08 | 6 |
endothelial cell of umbilical vein | 7.53e-08 | 3 |
blood vessel endothelial cell | 9.44e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.44e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
valve | 6.30e-16 | 3 |
cardiac mesenchyme | 6.30e-16 | 3 |
cardial valve | 6.30e-16 | 3 |
tunica intima | 6.30e-16 | 3 |
heart layer | 6.30e-16 | 3 |
endocardium | 6.30e-16 | 3 |
endocardial cushion | 6.30e-16 | 3 |
presumptive endocardium | 6.30e-16 | 3 |
adult organism | 3.19e-13 | 114 |
vessel | 1.03e-11 | 68 |
muscle structure | 1.18e-11 | 2 |
muscle organ | 1.18e-11 | 2 |
atrioventricular valve | 1.38e-11 | 2 |
cardiac atrium | 3.16e-11 | 2 |
future cardiac atrium | 3.16e-11 | 2 |
lymphatic vessel | 6.58e-11 | 8 |
lymph vasculature | 6.58e-11 | 8 |
lymphatic part of lymphoid system | 6.58e-11 | 8 |
vasculature | 7.79e-10 | 78 |
vascular system | 7.79e-10 | 78 |
circulatory system | 2.17e-09 | 112 |
lymphoid system | 9.80e-09 | 10 |
cardiovascular system | 1.98e-08 | 109 |
cardiac chamber | 9.23e-08 | 3 |
anatomical conduit | 1.48e-07 | 240 |
blood vessel layer | 4.35e-07 | 7 |
blood vessel endothelium | 9.44e-07 | 18 |
endothelium | 9.44e-07 | 18 |
cardiovascular system endothelium | 9.44e-07 | 18 |