FFCP PHASE1:Hg19::chr12:65996574..65996595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000539116_5end | |association_with_transcript=-53bp_to_ENST00000539116_5end | ||
|cluster_id=chr12:65996574..65996595,+ | |||
|description=CAGE_peak_2_at_ENST00000539116_5end | |description=CAGE_peak_2_at_ENST00000539116_5end | ||
|id=chr12:65996574..65996595,+ | |id=chr12:65996574..65996595,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.24e-30!180;CL:0000057!5.21e-19!75;CL:0002371!2.95e-17!591;CL:0000144!1.34e-14!625;CL:0000220!6.90e-14!246;CL:0000183!1.30e-13!59;CL:0002321!1.93e-13!248;CL:0000680!2.05e-13!57;CL:0000056!2.05e-13!57;CL:0000355!2.05e-13!57;CL:0000548!7.06e-13!679;CL:0000004!7.06e-13!679;CL:0000255!7.06e-13!679;CL:0000012!2.15e-12!682;CL:0000187!2.80e-12!54;CL:0000222!4.20e-12!119;CL:0002620!1.64e-11!23;CL:0000192!4.05e-10!42;CL:0000514!4.05e-10!42;CL:0000393!1.66e-09!60;CL:0000211!1.66e-09!60;CL:0000359!5.53e-08!32;CL:0000003!5.94e-08!722;CL:0002077!2.57e-07!33 | |ontology_enrichment_celltype=CL:0000055!1.24e-30!180;CL:0000057!5.21e-19!75;CL:0002371!2.95e-17!591;CL:0000144!1.34e-14!625;CL:0000220!6.90e-14!246;CL:0000183!1.30e-13!59;CL:0002321!1.93e-13!248;CL:0000680!2.05e-13!57;CL:0000056!2.05e-13!57;CL:0000355!2.05e-13!57;CL:0000548!7.06e-13!679;CL:0000004!7.06e-13!679;CL:0000255!7.06e-13!679;CL:0000012!2.15e-12!682;CL:0000187!2.80e-12!54;CL:0000222!4.20e-12!119;CL:0002620!1.64e-11!23;CL:0000192!4.05e-10!42;CL:0000514!4.05e-10!42;CL:0000393!1.66e-09!60;CL:0000211!1.66e-09!60;CL:0000359!5.53e-08!32;CL:0000003!5.94e-08!722;CL:0002077!2.57e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.30e-11;23!CL:0002540;8.11e-10;6!CL:0002092;2.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-11,76;CL:0002620,5.03e-11,23;CL:0002540,5.95e-10,6;CL:0002092,3.11e-07,10;CL:0000680,9.73e-07,58;CL:0000056,9.73e-07,58;CL:0000355,9.73e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.32e-19!83;UBERON:0002329!8.32e-19!83;UBERON:0003077!8.32e-19!83;UBERON:0003059!8.32e-19!83;UBERON:0007282!8.32e-19!83;UBERON:0009618!8.32e-19!83;UBERON:0007285!8.32e-19!83;UBERON:0003102!2.12e-17!95;UBERON:0002049!4.45e-15!79;UBERON:0007798!4.45e-15!79;UBERON:0000486!1.63e-14!82;UBERON:0004290!2.91e-13!70;UBERON:0002199!1.84e-12!45;UBERON:0002416!1.84e-12!45;UBERON:0002097!1.86e-12!40;UBERON:0001134!2.04e-11!61;UBERON:0002036!2.04e-11!61;UBERON:0003082!2.04e-11!61;UBERON:0005256!2.85e-11!143;UBERON:0000055!3.70e-11!69;UBERON:0002385!5.71e-11!63;UBERON:0001015!5.71e-11!63;UBERON:0000383!5.71e-11!63;UBERON:0001981!6.54e-11!60;UBERON:0007500!6.54e-11!60;UBERON:0004537!6.54e-11!60;UBERON:0006965!6.54e-11!60;UBERON:0000475!8.30e-11!365;UBERON:0004535!1.16e-09!110;UBERON:0001637!1.68e-09!42;UBERON:0003509!1.68e-09!42;UBERON:0004572!1.68e-09!42;UBERON:0000119!2.99e-09!312;UBERON:0000490!4.68e-09!138;UBERON:0001009!7.49e-09!113;UBERON:0004872!8.52e-09!84;UBERON:0000483!1.64e-08!309;UBERON:0001444!1.69e-08!48;UBERON:0004573!1.69e-08!33;UBERON:0004571!1.69e-08!33;UBERON:0000075!1.61e-07!13;UBERON:0005944!1.61e-07!13;UBERON:0004288!1.61e-07!13;UBERON:0003089!1.61e-07!13;UBERON:0000947!1.72e-07!21;UBERON:0010191!1.72e-07!21 | |ontology_enrichment_uberon=UBERON:0000914!8.32e-19!83;UBERON:0002329!8.32e-19!83;UBERON:0003077!8.32e-19!83;UBERON:0003059!8.32e-19!83;UBERON:0007282!8.32e-19!83;UBERON:0009618!8.32e-19!83;UBERON:0007285!8.32e-19!83;UBERON:0003102!2.12e-17!95;UBERON:0002049!4.45e-15!79;UBERON:0007798!4.45e-15!79;UBERON:0000486!1.63e-14!82;UBERON:0004290!2.91e-13!70;UBERON:0002199!1.84e-12!45;UBERON:0002416!1.84e-12!45;UBERON:0002097!1.86e-12!40;UBERON:0001134!2.04e-11!61;UBERON:0002036!2.04e-11!61;UBERON:0003082!2.04e-11!61;UBERON:0005256!2.85e-11!143;UBERON:0000055!3.70e-11!69;UBERON:0002385!5.71e-11!63;UBERON:0001015!5.71e-11!63;UBERON:0000383!5.71e-11!63;UBERON:0001981!6.54e-11!60;UBERON:0007500!6.54e-11!60;UBERON:0004537!6.54e-11!60;UBERON:0006965!6.54e-11!60;UBERON:0000475!8.30e-11!365;UBERON:0004535!1.16e-09!110;UBERON:0001637!1.68e-09!42;UBERON:0003509!1.68e-09!42;UBERON:0004572!1.68e-09!42;UBERON:0000119!2.99e-09!312;UBERON:0000490!4.68e-09!138;UBERON:0001009!7.49e-09!113;UBERON:0004872!8.52e-09!84;UBERON:0000483!1.64e-08!309;UBERON:0001444!1.69e-08!48;UBERON:0004573!1.69e-08!33;UBERON:0004571!1.69e-08!33;UBERON:0000075!1.61e-07!13;UBERON:0005944!1.61e-07!13;UBERON:0004288!1.61e-07!13;UBERON:0003089!1.61e-07!13;UBERON:0000947!1.72e-07!21;UBERON:0010191!1.72e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001434;4.98e-11;36!UBERON:0000075;1.13e-10;16!UBERON:0004765;1.93e-10;26!UBERON:0002097;9.20e-09;41!UBERON:0002199;3.14e-08;46!UBERON:0002416;3.14e-08;46!UBERON:0002204;9.50e-08;70!UBERON:0001828;9.52e-08;8!UBERON:0002371;1.01e-07;12!UBERON:0011137;4.93e-07;11!UBERON:0010323;4.93e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.71e-13,99;UBERON:0002097,4.14e-12,41;UBERON:0002199,2.98e-11,46;UBERON:0002416,2.98e-11,46;UBERON:0000075,1.70e-10,16;UBERON:0007524,2.69e-08,73;UBERON:0002049,2.96e-08,78;UBERON:0007798,2.96e-08,78;UBERON:0000486,3.67e-08,83;UBERON:0011137,3.76e-08,14;UBERON:0002329,5.49e-08,71;UBERON:0003059,5.49e-08,71;UBERON:0007282,5.49e-08,71;UBERON:0004290,5.49e-08,71;UBERON:0009618,5.49e-08,71;UBERON:0003077,8.72e-08,72;UBERON:0007285,8.72e-08,72;UBERON:0001828,1.29e-07,8;UBERON:0000033,2.06e-07,56;UBERON:0007503,2.12e-07,78;UBERON:0010323,8.42e-07,11 | |||
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| ||
|short_description=p2@ENST00000539116 | |short_description=p2@ENST00000539116 | ||
}} | }} |
Latest revision as of 11:25, 24 July 2015
Short description: | p2@ENST00000539116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000539116_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000539116_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-11 | 76 |
skin fibroblast | 5.03e-11 | 23 |
mesenchymal stem cell of the bone marrow | 5.95e-10 | 6 |
bone marrow cell | 3.11e-07 | 10 |
muscle precursor cell | 9.73e-07 | 58 |
myoblast | 9.73e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.73e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.71e-13 | 99 |
skin of body | 4.14e-12 | 41 |
integument | 2.98e-11 | 46 |
integumental system | 2.98e-11 | 46 |
subdivision of skeletal system | 1.70e-10 | 16 |
dense mesenchyme tissue | 2.69e-08 | 73 |
vasculature | 2.96e-08 | 78 |
vascular system | 2.96e-08 | 78 |
multilaminar epithelium | 3.67e-08 | 83 |
axial skeletal system | 3.76e-08 | 14 |
somite | 5.49e-08 | 71 |
presomitic mesoderm | 5.49e-08 | 71 |
presumptive segmental plate | 5.49e-08 | 71 |
dermomyotome | 5.49e-08 | 71 |
trunk paraxial mesoderm | 5.49e-08 | 71 |
paraxial mesoderm | 8.72e-08 | 72 |
presumptive paraxial mesoderm | 8.72e-08 | 72 |
gingiva | 1.29e-07 | 8 |
head | 2.06e-07 | 56 |
epithelial vesicle | 2.12e-07 | 78 |
cranial skeletal system | 8.42e-07 | 11 |