FFCP PHASE1:Hg19::chr12:71281837..71281862,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:71281837..71281862,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_at_chr12:71281837..71281862,- | |description=CAGE_peak_at_chr12:71281837..71281862,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!9.91e-09!8 | |ontology_enrichment_celltype=CL:0000047!9.91e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2!CL:0000540;1.50e-09;6!CL:0000404;1.50e-09;6!CL:0002319;2.30e-08;25 | |ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2!CL:0000540;1.50e-09;6!CL:0000404;1.50e-09;6!CL:0002319;2.30e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.43e-25,8;CL:0000540,1.57e-09,6;CL:0000031,1.57e-09,6;CL:0000404,1.57e-09,6;CL:0002319,2.30e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.50e-09;6 | |ontology_enrichment_development_v019=CL:0000031;1.50e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.98e-27!57;UBERON:0005068!1.98e-27!57;UBERON:0006241!1.98e-27!57;UBERON:0007135!1.98e-27!57;UBERON:0002616!2.06e-26!59;UBERON:0001017!2.78e-26!82;UBERON:0005743!6.39e-25!86;UBERON:0000073!7.46e-25!94;UBERON:0001016!7.46e-25!94;UBERON:0000955!7.72e-22!69;UBERON:0006238!7.72e-22!69;UBERON:0002771!1.02e-21!3;UBERON:0002780!1.61e-21!41;UBERON:0001890!1.61e-21!41;UBERON:0006240!1.61e-21!41;UBERON:0003080!5.73e-21!42;UBERON:0003075!1.22e-19!86;UBERON:0007284!1.22e-19!86;UBERON:0001869!4.47e-19!32;UBERON:0000200!1.09e-18!6;UBERON:0002346!1.25e-18!90;UBERON:0002619!4.45e-18!22;UBERON:0002020!5.88e-18!34;UBERON:0003528!5.88e-18!34;UBERON:0001893!6.84e-18!34;UBERON:0003056!2.27e-16!61;UBERON:0000956!7.24e-16!25;UBERON:0000203!7.24e-16!25;UBERON:0001905!9.98e-16!2;UBERON:0002757!9.98e-16!2;UBERON:0010134!9.98e-16!2;UBERON:0002784!9.98e-16!2;UBERON:0005408!9.98e-16!2;UBERON:0001899!9.98e-16!2;UBERON:0001950!2.93e-15!20;UBERON:0002791!5.28e-15!33;UBERON:0000033!2.05e-14!123;UBERON:0001871!2.62e-14!7;UBERON:0007023!4.41e-14!115;UBERON:0004121!8.22e-14!169;UBERON:0000153!1.36e-13!129;UBERON:0007811!1.36e-13!129;UBERON:0000924!2.09e-13!173;UBERON:0006601!2.09e-13!173;UBERON:0004733!1.69e-09!12;UBERON:0002028!1.69e-09!12;UBERON:0007277!1.69e-09!12;UBERON:0004732!8.88e-09!13;UBERON:0003112!2.33e-08!1;UBERON:0000032!2.33e-08!1;UBERON:0005253!2.33e-08!1;UBERON:0003128!2.33e-08!1;UBERON:0002241!2.33e-08!1;UBERON:0001703!2.33e-08!1;UBERON:0004761!2.33e-08!1;UBERON:0009617!2.33e-08!1;UBERON:0003296!2.69e-08!4;UBERON:0010133!2.69e-08!4;UBERON:0000025!5.74e-08!194;UBERON:0007190!6.24e-08!1;UBERON:0002022!7.16e-08!1;UBERON:0003076!1.27e-07!15;UBERON:0003057!1.27e-07!15;UBERON:0002680!1.34e-07!9;UBERON:0001895!1.34e-07!9;UBERON:0010092!1.34e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.98e-27!57;UBERON:0005068!1.98e-27!57;UBERON:0006241!1.98e-27!57;UBERON:0007135!1.98e-27!57;UBERON:0002616!2.06e-26!59;UBERON:0001017!2.78e-26!82;UBERON:0005743!6.39e-25!86;UBERON:0000073!7.46e-25!94;UBERON:0001016!7.46e-25!94;UBERON:0000955!7.72e-22!69;UBERON:0006238!7.72e-22!69;UBERON:0002771!1.02e-21!3;UBERON:0002780!1.61e-21!41;UBERON:0001890!1.61e-21!41;UBERON:0006240!1.61e-21!41;UBERON:0003080!5.73e-21!42;UBERON:0003075!1.22e-19!86;UBERON:0007284!1.22e-19!86;UBERON:0001869!4.47e-19!32;UBERON:0000200!1.09e-18!6;UBERON:0002346!1.25e-18!90;UBERON:0002619!4.45e-18!22;UBERON:0002020!5.88e-18!34;UBERON:0003528!5.88e-18!34;UBERON:0001893!6.84e-18!34;UBERON:0003056!2.27e-16!61;UBERON:0000956!7.24e-16!25;UBERON:0000203!7.24e-16!25;UBERON:0001905!9.98e-16!2;UBERON:0002757!9.98e-16!2;UBERON:0010134!9.98e-16!2;UBERON:0002784!9.98e-16!2;UBERON:0005408!9.98e-16!2;UBERON:0001899!9.98e-16!2;UBERON:0001950!2.93e-15!20;UBERON:0002791!5.28e-15!33;UBERON:0000033!2.05e-14!123;UBERON:0001871!2.62e-14!7;UBERON:0007023!4.41e-14!115;UBERON:0004121!8.22e-14!169;UBERON:0000153!1.36e-13!129;UBERON:0007811!1.36e-13!129;UBERON:0000924!2.09e-13!173;UBERON:0006601!2.09e-13!173;UBERON:0004733!1.69e-09!12;UBERON:0002028!1.69e-09!12;UBERON:0007277!1.69e-09!12;UBERON:0004732!8.88e-09!13;UBERON:0003112!2.33e-08!1;UBERON:0000032!2.33e-08!1;UBERON:0005253!2.33e-08!1;UBERON:0003128!2.33e-08!1;UBERON:0002241!2.33e-08!1;UBERON:0001703!2.33e-08!1;UBERON:0004761!2.33e-08!1;UBERON:0009617!2.33e-08!1;UBERON:0003296!2.69e-08!4;UBERON:0010133!2.69e-08!4;UBERON:0000025!5.74e-08!194;UBERON:0007190!6.24e-08!1;UBERON:0002022!7.16e-08!1;UBERON:0003076!1.27e-07!15;UBERON:0003057!1.27e-07!15;UBERON:0002680!1.34e-07!9;UBERON:0001895!1.34e-07!9;UBERON:0010092!1.34e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7 | |ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0002368,9.98e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884634079449797,0.295547618953547,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,4.82131652290458,10.7610791110024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884634079449797,0.295547618953547,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,4.82131652290458,10.7610791110024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:71281837..71281862,- | |short_description=p@chr12:71281837..71281862,- | ||
}} | }} |
Latest revision as of 12:09, 24 July 2015
Short description: | p@chr12:71281837..71281862, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:71281837..71281862, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.43e-25 | 8 |
neuron | 1.57e-09 | 6 |
neuroblast | 1.57e-09 | 6 |
electrically signaling cell | 1.57e-09 | 6 |
neural cell | 2.30e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
endocrine gland | 9.98e-07 | 35 |