FFCP PHASE1:Hg19::chr12:88200166..88200190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:88200166..88200190,- | |||
|description=CAGE_peak_at_chr12:88200166..88200190,- | |||
|id=chr12:88200166..88200190,- | |||
|ontology_enrichment_celltype=CL:0000066!1.75e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.73e-20;19!CL:0002536;1.35e-13;2!CL:0000650;1.80e-13;2!CL:1000500;1.80e-13;2!CL:1000618;1.80e-13;2!CL:1001318;1.80e-13;2!CL:0002173;1.80e-13;2!CL:0002537;2.59e-12;5!CL:0002577;4.35e-09;3!CL:0000319;1.97e-07;1!CL:0000669;3.65e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.88e-20,19;CL:0000650,1.44e-13,2;CL:1000500,1.44e-13,2;CL:1000618,1.44e-13,2;CL:1001318,1.44e-13,2;CL:0002173,1.44e-13,2;CL:0002536,1.54e-13,2;CL:0002537,2.45e-12,5;CL:0002577,4.54e-09,3;CL:0000319,2.17e-07,1;CL:0000669,3.28e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;7.50e-08;1!DOID:3030;1.97e-07;1!DOID:3571;1.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,6.80e-08,1;DOID:3571,1.58e-07,1;DOID:3030,2.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.51e-19!9;UBERON:0005631!7.18e-15!14;UBERON:0000158!7.18e-15!14;UBERON:0001557!8.19e-14!19;UBERON:0000305!7.20e-09!7;UBERON:0000478!1.04e-07!24;UBERON:0004871!1.10e-07!8;UBERON:0003124!1.19e-07!7;UBERON:0000065!2.95e-07!53;UBERON:0000072!7.27e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;8.48e-23;7!UBERON:0005631;1.37e-22;10!UBERON:0000158;1.37e-22;10!UBERON:0000478;1.02e-15;24!UBERON:0003567;1.80e-13;2!UBERON:0003838;1.80e-13;2!UBERON:0003586;1.80e-13;2!UBERON:0005169;1.80e-13;2!UBERON:0002321;1.80e-13;2!UBERON:0005215;1.80e-13;2!UBERON:0002303;1.80e-13;2!UBERON:0002319;1.80e-13;2!UBERON:0007195;1.97e-07;1!UBERON:0002426;1.97e-07;1!UBERON:0003831;1.97e-07;1!UBERON:0003898;1.97e-07;1!UBERON:0004830;1.97e-07;1!UBERON:0003830;1.97e-07;1!UBERON:0005175;1.97e-07;1!UBERON:0001774;1.97e-07;1!UBERON:0001103;1.97e-07;1!UBERON:0003891;3.65e-07;4!UBERON:0001987;5.05e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.98e-28,14;UBERON:0000158,9.98e-28,14;UBERON:0000305,8.69e-23,7;UBERON:0004871,6.37e-20,8;UBERON:0000478,1.05e-15,24;UBERON:0003567,1.44e-13,2;UBERON:0003838,1.44e-13,2;UBERON:0003586,1.44e-13,2;UBERON:0005169,1.44e-13,2;UBERON:0002321,1.44e-13,2;UBERON:0005215,1.44e-13,2;UBERON:0002303,1.44e-13,2;UBERON:0002319,1.44e-13,2;UBERON:0003124,1.65e-08,7;UBERON:0002426,1.91e-07,1;UBERON:0003831,1.91e-07,1;UBERON:0003898,1.91e-07,1;UBERON:0004830,1.91e-07,1;UBERON:0003830,1.91e-07,1;UBERON:0005175,1.91e-07,1;UBERON:0001774,1.91e-07,1;UBERON:0001103,1.91e-07,1;UBERON:0010084,1.91e-07,1;UBERON:0007195,3.17e-07,1;UBERON:0003891,3.28e-07,4;UBERON:0001987,5.22e-07,4;UBERON:0004340,5.22e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.49506195408276,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,2.21729397462564,0.702678285545008,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,1.18009283054671,1.20505514941741,0.661763836394364,0.653638332277218,0.949082476444386,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,3.6271555457805,1.99140405487612,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,1.20956117331872,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,1.89662506280697,2.00675909541941,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,2.53103539774981,0.571890581771475,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,3.56357616999166,10.7506245734731,0,0,0,0,13.5120261201916,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,18.4453073219837,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,4.55375273647668,0.277349346026277,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,14.7358851582977,1.15761237161917,0.734210113519403,1.79088841081487,0,0.657852148736121,0,0,0,0,0,0.607719912354764,0,0,0,0,0,1.2288645437686,0,0,0,0,7.9452233499357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,3.76675410273223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,1.8328549483524,0,0,0,0,0,0,0,1.1598144313382,0,0,0,1.9027214524411,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,0.0645889098360061,0.186224142887574,4.26101077806331,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0.640364075266293,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.49506195408276,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,2.21729397462564,0.702678285545008,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,1.18009283054671,1.20505514941741,0.661763836394364,0.653638332277218,0.949082476444386,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,3.6271555457805,1.99140405487612,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,1.20956117331872,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,1.89662506280697,2.00675909541941,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,2.53103539774981,0.571890581771475,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,3.56357616999166,10.7506245734731,0,0,0,0,13.5120261201916,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,18.4453073219837,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,4.55375273647668,0.277349346026277,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,14.7358851582977,1.15761237161917,0.734210113519403,1.79088841081487,0,0.657852148736121,0,0,0,0,0,0.607719912354764,0,0,0,0,0,1.2288645437686,0,0,0,0,7.9452233499357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,3.76675410273223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,1.8328549483524,0,0,0,0,0,0,0,1.1598144313382,0,0,0,1.9027214524411,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,0.0645889098360061,0.186224142887574,4.26101077806331,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0.640364075266293,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr12:88200166..88200190,- | |||
}} | }} |
Latest revision as of 13:10, 24 July 2015
Short description: | p@chr12:88200166..88200190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:88200166..88200190, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.88e-20 | 19 |
mesangial cell | 1.44e-13 | 2 |
kidney interstitial cell | 1.44e-13 | 2 |
juxtaglomerular complex cell | 1.44e-13 | 2 |
renal interstitial pericyte | 1.44e-13 | 2 |
extraglomerular mesangial cell | 1.44e-13 | 2 |
amniotic epithelial cell | 1.54e-13 | 2 |
amnion mesenchymal stem cell | 2.45e-12 | 5 |
placental epithelial cell | 4.54e-09 | 3 |
mucus secreting cell | 2.17e-07 | 1 |
pericyte cell | 3.28e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.98e-28 | 14 |
membranous layer | 9.98e-28 | 14 |
amnion | 8.69e-23 | 7 |
somatic layer of lateral plate mesoderm | 6.37e-20 | 8 |
extraembryonic structure | 1.05e-15 | 24 |
abdomen connective tissue | 1.44e-13 | 2 |
abdominal segment connective tissue | 1.44e-13 | 2 |
trunk connective tissue | 1.44e-13 | 2 |
interstitial tissue | 1.44e-13 | 2 |
extraglomerular mesangium | 1.44e-13 | 2 |
kidney interstitium | 1.44e-13 | 2 |
juxtaglomerular apparatus | 1.44e-13 | 2 |
mesangium | 1.44e-13 | 2 |
chorion | 1.65e-08 | 7 |
chest muscle | 1.91e-07 | 1 |
respiratory system muscle | 1.91e-07 | 1 |
skeletal muscle of trunk | 1.91e-07 | 1 |
respiratory system skeletal muscle | 1.91e-07 | 1 |
thoracic segment muscle | 1.91e-07 | 1 |
chest organ | 1.91e-07 | 1 |
muscle of trunk | 1.91e-07 | 1 |
diaphragm | 1.91e-07 | 1 |
future diaphragm | 1.91e-07 | 1 |
stroma of bone marrow | 3.17e-07 | 1 |
stroma | 3.28e-07 | 4 |
placenta | 5.22e-07 | 4 |
allantois | 5.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 6.80e-08 | 1 |
liver cancer | 1.58e-07 | 1 |
mucinous adenocarcinoma | 2.17e-07 | 1 |