FFCP PHASE1:Hg19::chr12:97859010..97859021,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:97859010..97859021,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr12:97859010..97859021,+ | |||
|id=chr12:97859010..97859021,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.08e-16!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.33e-49;5!CL:0000540;1.29e-23;6!CL:0000404;1.29e-23;6!CL:0002321;1.29e-16;15!CL:0000148;5.11e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.27e-49,5;CL:0000540,7.24e-24,6;CL:0000031,7.24e-24,6;CL:0000404,7.24e-24,6;CL:0000047,4.43e-18,8;CL:0000148,4.52e-07,10;CL:0000541,4.52e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.29e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;6.17e-09;2!DOID:4236;6.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,8.09e-09,2;DOID:4236,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.49e-46!57;UBERON:0005068!4.49e-46!57;UBERON:0006241!4.49e-46!57;UBERON:0007135!4.49e-46!57;UBERON:0003075!1.53e-38!86;UBERON:0007284!1.53e-38!86;UBERON:0002616!1.56e-38!59;UBERON:0005743!1.91e-38!86;UBERON:0001017!2.30e-38!82;UBERON:0002346!2.09e-36!90;UBERON:0000073!6.08e-34!94;UBERON:0001016!6.08e-34!94;UBERON:0000955!1.79e-33!69;UBERON:0006238!1.79e-33!69;UBERON:0002780!2.21e-27!41;UBERON:0001890!2.21e-27!41;UBERON:0006240!2.21e-27!41;UBERON:0007023!1.18e-26!115;UBERON:0003080!1.31e-26!42;UBERON:0003056!1.61e-24!61;UBERON:0000153!8.45e-24!129;UBERON:0007811!8.45e-24!129;UBERON:0000033!3.01e-22!123;UBERON:0003076!6.40e-22!15;UBERON:0003057!6.40e-22!15;UBERON:0004121!1.14e-20!169;UBERON:0000924!5.93e-20!173;UBERON:0006601!5.93e-20!173;UBERON:0002020!3.19e-19!34;UBERON:0003528!3.19e-19!34;UBERON:0001893!6.43e-19!34;UBERON:0004733!7.14e-19!12;UBERON:0002028!7.14e-19!12;UBERON:0007277!7.14e-19!12;UBERON:0001869!6.87e-18!32;UBERON:0004732!2.78e-17!13;UBERON:0002791!3.44e-17!33;UBERON:0001950!4.13e-14!20;UBERON:0003296!1.90e-13!4;UBERON:0010133!1.90e-13!4;UBERON:0002298!3.63e-13!8;UBERON:0000956!3.65e-13!25;UBERON:0000203!3.65e-13!25;UBERON:0002619!1.11e-12!22;UBERON:0002680!2.25e-11!9;UBERON:0001895!2.25e-11!9;UBERON:0010092!2.25e-11!9;UBERON:0001894!4.29e-11!7;UBERON:0006222!4.29e-11!7;UBERON:0001896!4.42e-10!3;UBERON:0005290!4.42e-10!3;UBERON:0010096!4.42e-10!3;UBERON:0000988!1.98e-09!3;UBERON:0000025!2.53e-09!194;UBERON:0000200!5.46e-08!6;UBERON:0002308!1.08e-07!9;UBERON:0000125!1.08e-07!9;UBERON:0000007!1.23e-07!2;UBERON:0000477!1.42e-07!286;UBERON:0001905!1.74e-07!2;UBERON:0002757!1.74e-07!2;UBERON:0010134!1.74e-07!2;UBERON:0002784!1.74e-07!2;UBERON:0005408!1.74e-07!2;UBERON:0001899!1.74e-07!2;UBERON:0002148!3.55e-07!2;UBERON:0009662!3.55e-07!2;UBERON:0001870!3.77e-07!2;UBERON:0000341!4.66e-07!2;UBERON:0000483!8.64e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.13e-34;4!UBERON:0010133;1.13e-34;4!UBERON:0000007;2.96e-31;2!UBERON:0001894;3.79e-20;7!UBERON:0001905;6.17e-09;2!UBERON:0002757;6.17e-09;2!UBERON:0010134;6.17e-09;2!UBERON:0005408;6.17e-09;2!UBERON:0001899;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.90e-34,4;UBERON:0010133,1.90e-34,4;UBERON:0000007,5.50e-31,2;UBERON:0001894,5.10e-20,7;UBERON:0006222,5.10e-20,7;UBERON:0001905,6.42e-09,2;UBERON:0002757,6.42e-09,2;UBERON:0010134,6.42e-09,2;UBERON:0005408,6.42e-09,2;UBERON:0001899,6.42e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,2.65059536642971,1.51052125730374,0.829288440122964,1.7662459561294,4.74470566798579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,1.21537496453305,0,0.120596438625408,0,0.442317039724898,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0.343609788497747,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,1.76828463311521,1.92555211236127,4.15440338029185,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0.665574309221114,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0.535701835878287,1.3451348888753,1.21393120847326,1.36597314810779,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.883164973845552,0.327796715891087,0,0,1.3360870263278,0,0,0,0,0,0.103432995861895,0.213233981900981,0.714193294391221,0,0,0,0.318235791390825,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:97859010..97859021,+ | |||
}} |
Latest revision as of 13:58, 24 July 2015
Short description: | p@chr12:97859010..97859021, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97859010..97859021, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.27e-49 | 5 |
neuron | 7.24e-24 | 6 |
neuroblast | 7.24e-24 | 6 |
electrically signaling cell | 7.24e-24 | 6 |
neuronal stem cell | 4.43e-18 | 8 |
melanocyte | 4.52e-07 | 10 |
melanoblast | 4.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.90e-34 | 4 |
neuroendocrine gland | 1.90e-34 | 4 |
pituitary gland | 5.50e-31 | 2 |
diencephalon | 5.10e-20 | 7 |
future diencephalon | 5.10e-20 | 7 |
pineal body | 6.42e-09 | 2 |
regional part of epithalamus | 6.42e-09 | 2 |
secretory circumventricular organ | 6.42e-09 | 2 |
circumventricular organ | 6.42e-09 | 2 |
epithalamus | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 8.09e-09 | 2 |
carcinosarcoma | 8.09e-09 | 2 |