FFCP PHASE1:Hg19::chr13:114920170..114920193,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114920170..114920193,+ | |||
|coexpression_cluster_id=C1336 | |||
|description=CAGE_peak_at_chr13:114920170..114920193,+ | |description=CAGE_peak_at_chr13:114920170..114920193,+ | ||
|id=chr13:114920170..114920193,+ | |id=chr13:114920170..114920193,+ | ||
|ontology_enrichment_celltype=CL:0000625!1.30e-38!11;CL:0000791!8.70e-23!18;CL:0000789!8.70e-23!18;CL:0002420!8.70e-23!18;CL:0002419!8.70e-23!18;CL:0000790!8.70e-23!18;CL:0000084!4.11e-19!25;CL:0000827!4.11e-19!25;CL:0000838!1.64e-17!52;CL:0000542!4.14e-17!53;CL:0000051!4.14e-17!53;CL:0000738!4.78e-14!140;CL:0000842!1.66e-13!3;CL:0000623!2.32e-13!3;CL:0000825!2.32e-13!3;CL:0000767!6.56e-13!3;CL:0002087!6.88e-12!119;CL:0000037!2.21e-11!172;CL:0000566!2.21e-11!172;CL:0000988!2.03e-10!182;CL:0000224!3.04e-10!4;CL:0002032!5.12e-08!165;CL:0000837!5.12e-08!165;CL:0002031!7.86e-08!124;CL:0000080!5.85e-07!6 | |ontology_enrichment_celltype=CL:0000625!1.30e-38!11;CL:0000791!8.70e-23!18;CL:0000789!8.70e-23!18;CL:0002420!8.70e-23!18;CL:0002419!8.70e-23!18;CL:0000790!8.70e-23!18;CL:0000084!4.11e-19!25;CL:0000827!4.11e-19!25;CL:0000838!1.64e-17!52;CL:0000542!4.14e-17!53;CL:0000051!4.14e-17!53;CL:0000738!4.78e-14!140;CL:0000842!1.66e-13!3;CL:0000623!2.32e-13!3;CL:0000825!2.32e-13!3;CL:0000767!6.56e-13!3;CL:0002087!6.88e-12!119;CL:0000037!2.21e-11!172;CL:0000566!2.21e-11!172;CL:0000988!2.03e-10!182;CL:0000224!3.04e-10!4;CL:0002032!5.12e-08!165;CL:0000837!5.12e-08!165;CL:0002031!7.86e-08!124;CL:0000080!5.85e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.19e-69;11!CL:0000791;3.64e-42;18!CL:0000789;3.64e-42;18!CL:0002419;3.64e-42;18!CL:0000084;4.74e-30;25!CL:0000226;2.16e-28;3!CL:0000842;2.16e-28;3!CL:0000542;2.00e-08;53!CL:0002087;3.66e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.06e-69,11;CL:0000791,3.39e-42,18;CL:0000789,3.39e-42,18;CL:0002420,3.39e-42,18;CL:0002419,3.39e-42,18;CL:0000790,3.39e-42,18;CL:0000084,4.51e-30,25;CL:0000827,4.51e-30,25;CL:0000226,3.48e-28,3;CL:0000842,3.48e-28,3;CL:0000838,3.61e-17,52;CL:0000542,8.10e-17,53;CL:0000051,8.10e-17,53;CL:0002087,6.79e-14,115;CL:0000738,2.67e-13,136;CL:0000037,2.57e-10,168;CL:0000988,1.14e-09,177;CL:0002031,5.92e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-42;18!CL:0000051;2.00e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.19e-26!15;UBERON:0000179!1.19e-26!15;UBERON:0000463!1.19e-26!15;UBERON:0002390!9.92e-07!102;UBERON:0003061!9.92e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.80e-39;15!UBERON:0000179;8.80e-39;15!UBERON:0000463;8.80e-39;15!UBERON:0002390;3.26e-17;32!UBERON:0002193;4.37e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.81e-39,15;UBERON:0000179,8.81e-39,15;UBERON:0000463,8.81e-39,15 | |||
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|short_description=p@chr13:114920170..114920193,+ | |short_description=p@chr13:114920170..114920193,+ | ||
}} | }} |
Latest revision as of 14:54, 24 July 2015
Short description: | p@chr13:114920170..114920193, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114920170..114920193, + |
Coexpression cluster: | C1336_CD8_Natural_Pericytes_Peripheral_medulla_thyroid_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.06e-69 | 11 |
mature alpha-beta T cell | 3.39e-42 | 18 |
alpha-beta T cell | 3.39e-42 | 18 |
immature T cell | 3.39e-42 | 18 |
mature T cell | 3.39e-42 | 18 |
immature alpha-beta T cell | 3.39e-42 | 18 |
T cell | 4.51e-30 | 25 |
pro-T cell | 4.51e-30 | 25 |
single nucleate cell | 3.48e-28 | 3 |
mononuclear cell | 3.48e-28 | 3 |
lymphoid lineage restricted progenitor cell | 3.61e-17 | 52 |
lymphocyte | 8.10e-17 | 53 |
common lymphoid progenitor | 8.10e-17 | 53 |
nongranular leukocyte | 6.79e-14 | 115 |
leukocyte | 2.67e-13 | 136 |
hematopoietic stem cell | 2.57e-10 | 168 |
hematopoietic cell | 1.14e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 5.92e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 8.81e-39 | 15 |
haemolymphatic fluid | 8.81e-39 | 15 |
organism substance | 8.81e-39 | 15 |