FFCP PHASE1:Hg19::chr13:31191097..31191149,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:31191097..31191149,- to FFCP PHASE1:Hg19::chr13:31191097..31191149,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:31191097..31191149,- | |||
|coexpression_cluster_id=C627 | |||
|description=CAGE_peak_at_chr13:31191097..31191149,- | |||
|id=chr13:31191097..31191149,- | |||
|ontology_enrichment_celltype=CL:0000738!7.60e-35!140;CL:0000037!2.96e-29!172;CL:0000566!2.96e-29!172;CL:0002031!1.16e-28!124;CL:0000988!1.27e-27!182;CL:0002032!5.82e-26!165;CL:0000837!5.82e-26!165;CL:0000766!1.21e-25!76;CL:0002087!2.72e-25!119;CL:0002057!6.67e-23!42;CL:0000860!9.41e-23!45;CL:0000557!1.83e-22!71;CL:0000839!1.26e-21!70;CL:0002009!2.10e-19!65;CL:0000763!4.12e-19!112;CL:0000049!4.12e-19!112;CL:0002194!2.20e-18!63;CL:0000576!2.20e-18!63;CL:0000040!2.20e-18!63;CL:0000559!2.20e-18!63;CL:0000134!3.75e-12!358;CL:0002320!7.60e-12!365;CL:0000219!4.48e-10!390;CL:0000048!3.79e-09!430;CL:0000034!1.85e-08!444;CL:0000723!5.05e-08!436;CL:0002393!1.21e-07!9;CL:0002397!1.21e-07!9;CL:0000236!2.74e-07!14;CL:0000838!3.22e-07!52;CL:0000542!8.99e-07!53;CL:0000051!8.99e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-24;33!CL:0002057;3.50e-24;33!CL:0000576;5.92e-23;48!CL:0000766;2.65e-21;69!CL:0000473;6.04e-21;39!CL:0000234;6.04e-21;39!CL:0002087;5.08e-12;104!CL:0000236;3.23e-10;13!CL:0000738;6.02e-10;136!CL:0000763;8.28e-10;100!CL:0000094;4.83e-09;8!CL:0002393;1.12e-08;6!CL:0002397;1.12e-08;6!CL:0000081;2.63e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.23e-47,136;CL:0000766,7.84e-46,72;CL:0000557,2.99e-40,67;CL:0002031,2.84e-38,120;CL:0000473,1.30e-37,48;CL:0000234,1.30e-37,48;CL:0000839,1.51e-37,66;CL:0000860,2.61e-37,42;CL:0002057,2.61e-37,42;CL:0000037,1.34e-36,168;CL:0000988,5.84e-35,177;CL:0002009,6.71e-35,61;CL:0002087,2.33e-34,115;CL:0002194,4.15e-33,59;CL:0000576,4.15e-33,59;CL:0000040,4.15e-33,59;CL:0000559,4.15e-33,59;CL:0002032,2.33e-32,161;CL:0000837,2.33e-32,161;CL:0000763,4.71e-29,108;CL:0000049,4.71e-29,108;CL:0002393,7.61e-12,9;CL:0002397,7.61e-12,9;CL:0000134,1.38e-10,354;CL:0002320,3.24e-10,361;CL:0000094,2.73e-09,8;CL:0000236,3.60e-09,14;CL:0000219,9.03e-08,386;CL:0000081,1.56e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-26;42!CL:0000049;5.40e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.39e-20!80;UBERON:0001474!4.02e-19!86;UBERON:0002405!1.12e-18!115;UBERON:0002193!6.93e-18!112;UBERON:0002390!7.18e-18!102;UBERON:0003061!7.18e-18!102;UBERON:0004765!3.20e-15!101;UBERON:0001434!3.20e-15!101;UBERON:0002384!1.08e-10!375;UBERON:0007023!2.17e-07!115;UBERON:0002204!5.17e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-37,76;UBERON:0001474,1.30e-34,82;UBERON:0002390,2.07e-34,98;UBERON:0003061,2.07e-34,98;UBERON:0002405,1.18e-32,93;UBERON:0002193,7.80e-31,108;UBERON:0004765,1.35e-29,90;UBERON:0001434,1.64e-24,100;UBERON:0003081,1.24e-12,203;UBERON:0002204,5.02e-10,167;UBERON:0002384,1.44e-09,371 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,0,1.34088328328186,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0.61130724598361,0.492603536699674,0.393553906568396,12.5876568591649,13.4340289334024,12.8497382352343,0,0,0,0.232401601740905,0.284338464974843,3.52320527201817,19.9438347071476,16.0435557976113,12.3696196308036,4.47830948479849,1.94336199611388,2.31818010870768,1.74477886535478,2.26725566213286,1.69808842831471,7.43772918098191,5.75635043230556,14.5561994320699,3.74000110018796,4.35473201099471,4.7296445977717,17.9267753983042,25.1739026597692,24.3767675869815,3.01187743268168,2.72906150057846,7.86532195557796,6.42776173978895,8.98601275813062,10.2293940127847,1.31940520074686,0.598390972864896,0,1.16083695451434,1.13477044938228,2.4912889959823,9.79869794501299,6.25779502104242,9.33912032232002,1.81619850790011,4.05105399586321,2.84816148696796,15.6328911870837,17.8587611970637,18.2403021592287,13.1424498441399,6.90813707070929,8.03627933485401,11.4005097496499,6.16641699317179,10.959849225878,3.51992488922645,3.27683166757279,6.22656477704488,8.96133467389665,8.00791974072025,10.9202963591352,7.93253847341835,5.72432252721218,6.26134266020393,7.6340834618222,10.3213771593812,1.32171328579026,2.24203425192614,1.31692042387539,0.786839080455332,0.786021525498329,1.43921049299656,0.167186495390678,1.62961133316795,0.946895611469467,0,1.11410456885174,1.17842362989935,1.10766947291811,1.62482318259009,0.25618263945135,0.650296737799391,0.493313713811028,1.38175008892924,1.15921234294021,0.741432815810302,1.33770414044857,1.04535523804977,1.13309342697566,1.53288197440768,2.40539211837841,0.506039384039006,0.95569624297229,0.651083453856419,1.90090408889675,0.903450714466637,0.76791966692651,3.74792179657038,0.710331756132051,0,1.81446068902259,0.534880391567015,1.15859523106239,0,0,0.255725123687061,0,0.50133791063589,0.289693037921647,0.795285947051099,0,0.850813354476611,0,0.43917392846563,1.24430121722827,0.364295288292542,0,0.324547393654683,0,0.398873881556595,5.96226560763355,5.14795419702115,4.08603251462521,0.596287222100115,0,0,0,0,0,0.626984899610432,0.775250277507987,1.06729878806013,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0.81014194788176,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0,2.63560834872127,11.6334079244498,0,0,0.379891534993739,2.51577443545116,1.43418310374407,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0,0.404132016209064,0.326923806226917,0.454072282934794,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0.45071417671979,0,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.675105328965065,0.487185025805993,0.252433774244115,0.184099797284599,0.969876340912871,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.518305275076852,0,0.36497735907583,0,0,0,0,1.44375896333917,0,0,0,0.110293972732394,0,0,0.943819157121151,0.784885860501384,0.769494313892781,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0.882926198829301,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.577465791044295,0,0.951270761172991,0.790204397959275,0,1.72351904261178,1.17002132569619,0.148631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,2.95597942737566,1.32072651019839,27.7819674824635,18.0149941771202,27.3946080535244,0.380987365753014,1.14596527667483,1.17217447210047,0,0.514137463516618,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0.710783897485092,0,0,1.74306691720059,0.499864955910285,3.64871341923571,0,2.10833939483032,0,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,3.34952292343276,2.80315847317372,4.74869234235069,0.76228387266739,0,0,0.670065061337395,0.637938751653163,2.99602809578873,5.9832291840805,1.65766205374414,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.521301686808497,0.587403472388222,1.71571711905428,5.37596867919507,12.0799952458425,2.34800627167578,0.303127571446259,0,0,0.248107807818777,1.84154367945675,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.813472649219715,0.120859449591622,0,0,0.459257792658427,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,1.54227252690289,0,0,0.254876273045038,0,0,0.877039506583738,1.3071772551245,0.256450125116389,0,0,5.15205058238611,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.616194468458578,0.307007349452259,0,0.322260734604821,0,0.255679882248303,0.178064071293475,0.165284915360978,0,0,0,0,0.62962469366128,1.3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| ||
|short_description=p@chr13:31191097..31191149,- | |||
}} | }} |
Latest revision as of 15:32, 24 July 2015
Short description: | p@chr13:31191097..31191149, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31191097..31191149, - |
Coexpression cluster: | C627_Mast_Eosinophils_CD14_Neutrophils_Basophils_immature_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.23e-47 | 136 |
myeloid leukocyte | 7.84e-46 | 72 |
granulocyte monocyte progenitor cell | 2.99e-40 | 67 |
hematopoietic lineage restricted progenitor cell | 2.84e-38 | 120 |
defensive cell | 1.30e-37 | 48 |
phagocyte | 1.30e-37 | 48 |
myeloid lineage restricted progenitor cell | 1.51e-37 | 66 |
classical monocyte | 2.61e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.61e-37 | 42 |
hematopoietic stem cell | 1.34e-36 | 168 |
hematopoietic cell | 5.84e-35 | 177 |
macrophage dendritic cell progenitor | 6.71e-35 | 61 |
nongranular leukocyte | 2.33e-34 | 115 |
monopoietic cell | 4.15e-33 | 59 |
monocyte | 4.15e-33 | 59 |
monoblast | 4.15e-33 | 59 |
promonocyte | 4.15e-33 | 59 |
hematopoietic oligopotent progenitor cell | 2.33e-32 | 161 |
hematopoietic multipotent progenitor cell | 2.33e-32 | 161 |
myeloid cell | 4.71e-29 | 108 |
common myeloid progenitor | 4.71e-29 | 108 |
intermediate monocyte | 7.61e-12 | 9 |
CD14-positive, CD16-positive monocyte | 7.61e-12 | 9 |
mesenchymal cell | 1.38e-10 | 354 |
connective tissue cell | 3.24e-10 | 361 |
granulocyte | 2.73e-09 | 8 |
B cell | 3.60e-09 | 14 |
motile cell | 9.03e-08 | 386 |
blood cell | 1.56e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-37 | 76 |
bone element | 1.30e-34 | 82 |
hematopoietic system | 2.07e-34 | 98 |
blood island | 2.07e-34 | 98 |
immune system | 1.18e-32 | 93 |
hemolymphoid system | 7.80e-31 | 108 |
skeletal element | 1.35e-29 | 90 |
skeletal system | 1.64e-24 | 100 |
lateral plate mesoderm | 1.24e-12 | 203 |
musculoskeletal system | 5.02e-10 | 167 |
connective tissue | 1.44e-09 | 371 |