FFCP PHASE1:Hg19::chr13:31714687..31714691,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr13:31714687..31714691,- to FFCP PHASE1:Hg19::chr13:31714687..31714691,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:31714687..31714691,- | |||
|description=CAGE_peak_at_chr13:31714687..31714691,- | |||
|id=chr13:31714687..31714691,- | |||
|ontology_enrichment_celltype=CL:0002057!1.86e-09!42;CL:0002031!2.67e-09!124;CL:0000738!3.02e-09!140;CL:0000860!6.44e-09!45;CL:0002087!1.30e-08!119;CL:0000839!5.48e-08!70;CL:0000037!3.71e-07!172;CL:0000566!3.71e-07!172;CL:0000557!4.73e-07!71;CL:0000766!4.77e-07!76;CL:0000988!5.22e-07!182;CL:0002032!6.74e-07!165;CL:0000837!6.74e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.50e-12;18!CL:0000789;2.50e-12;18!CL:0002419;2.50e-12;18!CL:0000624;4.93e-10;6!CL:0000084;9.91e-09;25!CL:0000222;1.22e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.04e-12,18;CL:0000789,2.04e-12,18;CL:0002420,2.04e-12,18;CL:0002419,2.04e-12,18;CL:0000790,2.04e-12,18;CL:0000624,3.66e-10,6;CL:0002031,5.07e-09,120;CL:0000084,8.59e-09,25;CL:0000827,8.59e-09,25;CL:0002087,3.93e-08,115;CL:0000738,1.25e-07,136;CL:0000838,8.84e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;2.50e-12;18!UBERON:0005062;1.54e-07;4!UBERON:0007284;1.54e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;3.21e-14;2!UBERON:0003978;8.90e-10;3!UBERON:0000946;8.90e-10;3!UBERON:0000996;2.79e-08;1!UBERON:0002134;2.79e-08;1!UBERON:0005208;2.79e-08;1!UBERON:0004145;2.79e-08;1!UBERON:0005946;2.79e-08;1!UBERON:0005965;2.79e-08;1!UBERON:0002078;2.79e-08;1!UBERON:0002038;1.22e-07;1!UBERON:0002135;1.22e-07;1!UBERON:0009661;1.22e-07;1!UBERON:0002950;1.22e-07;1!UBERON:0001891;1.22e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.77e-14,2;UBERON:0003978,1.16e-09,3;UBERON:0009751,1.16e-09,3;UBERON:0000946,1.16e-09,3;UBERON:0002523,1.16e-09,3;UBERON:0005983,1.16e-09,3;UBERON:0002165,1.16e-09,3;UBERON:0002062,1.16e-09,3;UBERON:0007280,1.16e-09,3;UBERON:0000996,2.70e-08,1;UBERON:0002134,2.89e-08,1;UBERON:0005208,2.89e-08,1;UBERON:0005946,2.89e-08,1;UBERON:0005965,2.89e-08,1;UBERON:0002078,2.89e-08,1;UBERON:0002038,1.35e-07,1;UBERON:0009661,1.35e-07,1;UBERON:0002950,1.35e-07,1;UBERON:0001891,1.35e-07,1;UBERON:0009616,1.35e-07,1;UBERON:0010286,1.35e-07,1;UBERON:0002135,1.75e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0,0,0.383829398097213,0.309632246632152,0,0,0,0.46480320348181,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,2.46700732813095,0.929119112685311,0.863077176966451,1.0246428261164,0.236482229888585,1.03423704220986,3.22742341791913,2.70852973188684,0.188242339542605,0.818718450173537,0.674170453335254,0.612167784741805,0,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,2.4912889959823,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,1.180258620683,1.17903228824749,1.85041349099558,0,0,0.473447805734733,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41928091869679,2.40696176205157,1.30341963494519,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.696518949197069,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0.141775097242386,0,0.290633938513962,0.383382679165211,0.492663237895943,0.088048434013226,0.829312462163088,0.288239906833923,3.91351543621778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0.448340575974109,0.591092280605782,0.862510299438069,1.28343036279748,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0.522870902049801,0,0,0,5.564214628977,0.183138929636687,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46034044505319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,0.284567373393656,0,0.399158742865633,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.71623345421307,0,0.614321404198464,0,0.562677665642051,0.222617410045812,0,1.26675244876796,0.19924798825107,0,0,0,0.615424027305347,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.658156191461918,0.10893846351899,0.278847488557207,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0,0.282706142867882,0,0.995261931078505,0.176915129006678,0,0.889563386041866,0.247127877893006,0,0,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0.391969589657511,0.261177619741208,0,0,0,0,0.164230914106418,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0.599428828746391,0,0.114536596165916,0,0,2.48505071130865,0.235694034616795,0,0.209205692624666,0.611989305817931,0,0,0.821432273351958,0,0,0.262887354279314,1.11712960508902,0.229160424011684,7.17873024576814,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.79339561045614,0.171086837884329,0,0.427149650270779,0,0.414239055347196,0,0,0.121792598380896,0,3.80812462358632,2.506898940227,0.919036730290385,0.983617892129413,0.314108192500469,0,0,0.625954653532499,0,0.776503360757966,0,0,0.124980407962107,0,0,0.235265819698172,0,0.434763085832475,0,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0.214441591374926,0,0.680117776536817,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0.637724760305049,0.123935764259002,0,0,0.47317047000752,0,0,0,0,0,1.11743701340006,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0.235939446695481,0.183428598521679,0.5776283307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| ||
|short_description=p@chr13:31714687..31714691,- | |||
}} | }} |
Latest revision as of 15:36, 24 July 2015
Short description: | p@chr13:31714687..31714691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31714687..31714691, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.04e-12 | 18 |
alpha-beta T cell | 2.04e-12 | 18 |
immature T cell | 2.04e-12 | 18 |
mature T cell | 2.04e-12 | 18 |
immature alpha-beta T cell | 2.04e-12 | 18 |
CD4-positive, alpha-beta T cell | 3.66e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 5.07e-09 | 120 |
T cell | 8.59e-09 | 25 |
pro-T cell | 8.59e-09 | 25 |
nongranular leukocyte | 3.93e-08 | 115 |
leukocyte | 1.25e-07 | 136 |
lymphoid lineage restricted progenitor cell | 8.84e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 4.77e-14 | 2 |
valve | 1.16e-09 | 3 |
cardiac mesenchyme | 1.16e-09 | 3 |
cardial valve | 1.16e-09 | 3 |
tunica intima | 1.16e-09 | 3 |
heart layer | 1.16e-09 | 3 |
endocardium | 1.16e-09 | 3 |
endocardial cushion | 1.16e-09 | 3 |
presumptive endocardium | 1.16e-09 | 3 |
vagina | 2.70e-08 | 1 |
tricuspid valve | 2.89e-08 | 1 |
right atrium valve | 2.89e-08 | 1 |
outflow tract of atrium | 2.89e-08 | 1 |
outflow part of right atrium | 2.89e-08 | 1 |
right cardiac atrium | 2.89e-08 | 1 |
substantia nigra | 1.35e-07 | 1 |
midbrain nucleus | 1.35e-07 | 1 |
regional part of midbrain | 1.35e-07 | 1 |
midbrain | 1.35e-07 | 1 |
presumptive midbrain | 1.35e-07 | 1 |
midbrain neural tube | 1.35e-07 | 1 |
mitral valve | 1.75e-07 | 1 |