FFCP PHASE1:Hg19::chr13:43544804..43544814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:43544804..43544814,- | |||
|description=CAGE_peak_at_chr13:43544804..43544814,- | |description=CAGE_peak_at_chr13:43544804..43544814,- | ||
|id=chr13:43544804..43544814,- | |id=chr13:43544804..43544814,- | ||
|ontology_enrichment_celltype=CL:0002057!2.50e-17!42;CL:0000860!2.39e-15!45;CL:0002087!1.74e-12!119;CL:0002194!5.96e-12!63;CL:0000576!5.96e-12!63;CL:0000040!5.96e-12!63;CL:0000559!5.96e-12!63;CL:0002009!3.35e-11!65;CL:0000839!4.39e-11!70;CL:0002031!2.78e-10!124;CL:0000557!6.64e-10!71;CL:0000766!2.66e-09!76;CL:0000738!4.48e-09!140 | |ontology_enrichment_celltype=CL:0002057!2.50e-17!42;CL:0000860!2.39e-15!45;CL:0002087!1.74e-12!119;CL:0002194!5.96e-12!63;CL:0000576!5.96e-12!63;CL:0000040!5.96e-12!63;CL:0000559!5.96e-12!63;CL:0002009!3.35e-11!65;CL:0000839!4.39e-11!70;CL:0002031!2.78e-10!124;CL:0000557!6.64e-10!71;CL:0000766!2.66e-09!76;CL:0000738!4.48e-09!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.68e-25;33!CL:0002057;2.68e-25;33!CL:0000473;1.72e-20;39!CL:0000234;1.72e-20;39!CL:0000576;1.61e-15;48!CL:0000766;3.62e-08;69!CL:0000346;2.75e-07;3!CL:1000428;2.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.50e-24,42;CL:0002057,7.50e-24,42;CL:0000473,2.25e-23,48;CL:0000234,2.25e-23,48;CL:0002194,5.68e-18,59;CL:0000576,5.68e-18,59;CL:0000040,5.68e-18,59;CL:0000559,5.68e-18,59;CL:0002009,2.82e-17,61;CL:0000766,3.79e-16,72;CL:0000839,1.02e-15,66;CL:0000557,1.96e-15,67;CL:0000763,6.61e-11,108;CL:0000049,6.61e-11,108;CL:0002087,1.02e-08,115;CL:0002031,3.30e-08,120;CL:0000738,7.57e-08,136;CL:0000346,2.13e-07,3;CL:1000428,2.13e-07,3;CL:0002032,6.27e-07,161;CL:0000837,6.27e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.53e-18;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!3.34e-10!101;UBERON:0001434!3.34e-10!101;UBERON:0002390!6.27e-10!102;UBERON:0003061!6.27e-10!102;UBERON:0002371!1.32e-09!80;UBERON:0002204!6.33e-09!167;UBERON:0001474!8.51e-09!86;UBERON:0002193!2.65e-08!112 | |ontology_enrichment_uberon=UBERON:0004765!3.34e-10!101;UBERON:0001434!3.34e-10!101;UBERON:0002390!6.27e-10!102;UBERON:0003061!6.27e-10!102;UBERON:0002371!1.32e-09!80;UBERON:0002204!6.33e-09!167;UBERON:0001474!8.51e-09!86;UBERON:0002193!2.65e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.75e-07;3!UBERON:0001992;2.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.70e-15,82;UBERON:0002371,4.27e-15,76;UBERON:0004765,8.91e-14,90;UBERON:0001434,1.46e-13,100;UBERON:0002405,1.11e-11,93;UBERON:0002390,6.70e-11,98;UBERON:0003061,6.70e-11,98;UBERON:0002193,1.47e-09,108;UBERON:0002204,2.15e-09,167;UBERON:0000412,2.13e-07,3;UBERON:0001992,2.13e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.687720651731561,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.651032612147555,0.223915474239924,0,0,0.290796477559129,0.755751887377619,0.485168122375632,0,0.411167888021826,0,4.89077066947656,4.09857130446561,3.31075121844019,0.689491361473237,0,0,1.50593871634084,0.818718450173537,0,1.53041946185451,0.320929027076094,0,4.94776950280074,4.9865914405408,7.6720455095885,4.64334781805734,2.8369261234557,0,6.53246529667532,7.30076085788282,4.12658804939722,1.21079900526674,0.368277635987565,0.316462387440884,1.05627643155971,0.212604299965044,0.419317291016752,0.22465726229299,0.150176892841506,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.668462741311041,0.883817722424512,0,1.08321545506006,0.384273959177026,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.226618685395132,0,0.68725489096526,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2333377420858,0,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,3.21447008062124,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0.402115889646523,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,0,2.99161459204025,0,0,0,0.813795071099207,1.87173775377726,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,1.55776328755086,0.232420756919918,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0,0,0.328014645699706,0,0,0,0,0,0,0,0.290012154876366,0,0.307007349452259,0.137836572484531,0.537101224341368,0.580066775656914,0,0.0890320356467374,0,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0.48763373908959,5.11798328225697,0,0,0,0,0,0.66343897524122,1.31535265576129,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.633322905892992,1.31717957183961,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,1.59663497146253,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.828851746593443,0.755798243562828,0.102268682502155,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,1.22206028986725,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,2.93327074102205,0,0,0.39961921916426,0.144090417154106,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.0620964029413835,0,0,0,0,4.9405822136616,0,0,0,0.233713309847224,0,0,0.251567901752575,2.66943366478961,0,0,0,0,0.159296767163702,0,0,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0,0,0,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0.453411851024545,0,4.64999738562288,0.179088841081487,0,0,0,0,0,0,0,0.607719912354764,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0.688859918643263,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,1.8374728641192,0,0,0,0,0,0,0.322951291263702,0,0,0,1.28400018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| ||
|short_description=p@chr13:43544804..43544814,- | |short_description=p@chr13:43544804..43544814,- | ||
}} | }} |
Latest revision as of 16:07, 24 July 2015
Short description: | p@chr13:43544804..43544814, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43544804..43544814, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.50e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.50e-24 | 42 |
defensive cell | 2.25e-23 | 48 |
phagocyte | 2.25e-23 | 48 |
monopoietic cell | 5.68e-18 | 59 |
monocyte | 5.68e-18 | 59 |
monoblast | 5.68e-18 | 59 |
promonocyte | 5.68e-18 | 59 |
macrophage dendritic cell progenitor | 2.82e-17 | 61 |
myeloid leukocyte | 3.79e-16 | 72 |
myeloid lineage restricted progenitor cell | 1.02e-15 | 66 |
granulocyte monocyte progenitor cell | 1.96e-15 | 67 |
myeloid cell | 6.61e-11 | 108 |
common myeloid progenitor | 6.61e-11 | 108 |
nongranular leukocyte | 1.02e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.30e-08 | 120 |
leukocyte | 7.57e-08 | 136 |
hair follicle dermal papilla cell | 2.13e-07 | 3 |
stem cell of epidermis | 2.13e-07 | 3 |
hematopoietic oligopotent progenitor cell | 6.27e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.27e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.70e-15 | 82 |
bone marrow | 4.27e-15 | 76 |
skeletal element | 8.91e-14 | 90 |
skeletal system | 1.46e-13 | 100 |
immune system | 1.11e-11 | 93 |
hematopoietic system | 6.70e-11 | 98 |
blood island | 6.70e-11 | 98 |
hemolymphoid system | 1.47e-09 | 108 |
musculoskeletal system | 2.15e-09 | 167 |
dermal papilla | 2.13e-07 | 3 |
papillary layer of dermis | 2.13e-07 | 3 |