FFCP PHASE1:Hg19::chr13:46275659..46275671,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:46275659..46275671,- | |||
|coexpression_cluster_id=C826 | |||
|description=CAGE_peak_at_chr13:46275659..46275671,- | |description=CAGE_peak_at_chr13:46275659..46275671,- | ||
|id=chr13:46275659..46275671,- | |id=chr13:46275659..46275671,- | ||
|ontology_enrichment_celltype=CL:0000453!1.65e-15!5;CL:0000080!2.31e-13!6;CL:0000945!2.36e-12!24;CL:0000826!2.36e-12!24;CL:0000838!1.68e-09!52;CL:0000542!2.66e-09!53;CL:0000051!2.66e-09!53;CL:0000990!7.45e-09!8;CL:0000451!2.49e-07!10 | |ontology_enrichment_celltype=CL:0000453!1.65e-15!5;CL:0000080!2.31e-13!6;CL:0000945!2.36e-12!24;CL:0000826!2.36e-12!24;CL:0000838!1.68e-09!52;CL:0000542!2.66e-09!53;CL:0000051!2.66e-09!53;CL:0000990!7.45e-09!8;CL:0000451!2.49e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.82e-15;24!CL:0000542;1.93e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.36e-15,52;CL:0000945,3.96e-15,24;CL:0000826,3.96e-15,24;CL:0000542,4.59e-15,53;CL:0000051,4.59e-15,53;CL:0000988,1.04e-07,177;CL:0002087,7.40e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.93e-08;53 | |||
|ontology_enrichment_disease=DOID:0060060!4.46e-10!1;DOID:0060061!4.46e-10!1;DOID:8691!4.46e-10!1;DOID:630!6.31e-10!1;DOID:0050177!6.31e-10!1;DOID:0050427!6.31e-10!1;DOID:2355!1.48e-09!1;DOID:0060058!3.55e-08!10 | |ontology_enrichment_disease=DOID:0060060!4.46e-10!1;DOID:0060061!4.46e-10!1;DOID:8691!4.46e-10!1;DOID:630!6.31e-10!1;DOID:0050177!6.31e-10!1;DOID:0050427!6.31e-10!1;DOID:2355!1.48e-09!1;DOID:0060058!3.55e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.87e-23;1!DOID:0060061;1.87e-23;1!DOID:8691;1.87e-23;1!DOID:630;3.67e-23;1!DOID:0050177;3.67e-23;1!DOID:0050427;3.67e-23;1!DOID:0060058;9.23e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.67e-23,1;DOID:0060061,1.67e-23,1;DOID:8691,1.67e-23,1;DOID:630,4.10e-23,1;DOID:0050177,4.10e-23,1;DOID:0050427,4.10e-23,1;DOID:0060058,9.24e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002363!2.46e-09!1;UBERON:0007647!2.46e-09!1;UBERON:0010115!2.46e-09!1;UBERON:0002331!3.22e-08!10;UBERON:0000358!3.22e-08!10;UBERON:0000307!3.22e-08!10;UBERON:0000091!3.22e-08!10;UBERON:0000087!3.22e-08!10;UBERON:0007806!3.22e-08!10;UBERON:0008780!3.22e-08!10;UBERON:0005728!3.22e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.05e-09;10!UBERON:0002106;1.46e-08;3!UBERON:0002390;7.64e-07;32!UBERON:0000178;9.09e-07;15!UBERON:0000179;9.09e-07;15!UBERON:0000463;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.01e-09,10;UBERON:0000358,1.01e-09,10;UBERON:0000307,1.01e-09,10;UBERON:0000091,1.01e-09,10;UBERON:0000087,1.01e-09,10;UBERON:0007010,1.01e-09,10;UBERON:0007806,1.01e-09,10;UBERON:0008780,1.01e-09,10;UBERON:0005728,1.01e-09,10;UBERON:0002106,1.51e-08,3;UBERON:0004854,1.51e-08,3;UBERON:0009034,1.51e-08,3;UBERON:0002095,1.51e-08,3;UBERON:0004782,1.51e-08,3;UBERON:0003281,1.51e-08,3;UBERON:0009664,1.51e-08,3;UBERON:0002296,1.51e-08,3;UBERON:0005602,1.51e-08,3;UBERON:0001179,1.51e-08,3;UBERON:0006293,1.51e-08,3;UBERON:0000178,8.83e-07,15;UBERON:0000179,8.83e-07,15;UBERON:0000463,8.83e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36218985290986,3.61242593579761,3.22714203386085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,1.72989514525104,0.835375596043643,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,3.39978572953381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36218985290986,3.61242593579761,3.22714203386085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,1.72989514525104,0.835375596043643,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.327130788511688,0,0,0,3.39978572953381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | ||
|short_description=p@chr13:46275659..46275671,- | |short_description=p@chr13:46275659..46275671,- | ||
}} | }} |
Latest revision as of 16:17, 24 July 2015
Short description: | p@chr13:46275659..46275671, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46275659..46275671, - |
Coexpression cluster: | C826_hairy_B_mycosis_cord_xeroderma_neuroblastoma_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.36e-15 | 52 |
lymphocyte of B lineage | 3.96e-15 | 24 |
pro-B cell | 3.96e-15 | 24 |
lymphocyte | 4.59e-15 | 53 |
common lymphoid progenitor | 4.59e-15 | 53 |
hematopoietic cell | 1.04e-07 | 177 |
nongranular leukocyte | 7.40e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.01e-09 | 10 |
blastocyst | 1.01e-09 | 10 |
blastula | 1.01e-09 | 10 |
bilaminar disc | 1.01e-09 | 10 |
inner cell mass | 1.01e-09 | 10 |
cleaving embryo | 1.01e-09 | 10 |
connecting stalk | 1.01e-09 | 10 |
inner cell mass derived epiblast | 1.01e-09 | 10 |
extraembryonic mesoderm | 1.01e-09 | 10 |
spleen | 1.51e-08 | 3 |
gastrointestinal system mesentery | 1.51e-08 | 3 |
stomach region | 1.51e-08 | 3 |
mesentery | 1.51e-08 | 3 |
gastrointestinal system serosa | 1.51e-08 | 3 |
mesentery of stomach | 1.51e-08 | 3 |
gut mesentery | 1.51e-08 | 3 |
dorsal mesentery | 1.51e-08 | 3 |
dorsal mesogastrium | 1.51e-08 | 3 |
peritoneal cavity | 1.51e-08 | 3 |
spleen primordium | 1.51e-08 | 3 |
blood | 8.83e-07 | 15 |
haemolymphatic fluid | 8.83e-07 | 15 |
organism substance | 8.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.67e-23 | 1 |
cutaneous T cell lymphoma | 1.67e-23 | 1 |
mycosis fungoides | 1.67e-23 | 1 |
genetic disease | 4.10e-23 | 1 |
monogenic disease | 4.10e-23 | 1 |
xeroderma pigmentosum | 4.10e-23 | 1 |
lymphoma | 9.24e-10 | 10 |