FFCP PHASE1:Hg19::chr14:103018614..103018692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:103018614..103018692,+ | |||
|description=CAGE_peak_at_chr14:103018614..103018692,+ | |description=CAGE_peak_at_chr14:103018614..103018692,+ | ||
|id=chr14:103018614..103018692,+ | |id=chr14:103018614..103018692,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.93e-16!254;CL:0002076!7.18e-14!43;CL:0000223!1.76e-08!59;CL:0002368!2.19e-08!13;CL:0002251!2.43e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.93e-16!254;CL:0002076!7.18e-14!43;CL:0000223!1.76e-08!59;CL:0002368!2.19e-08!13;CL:0002251!2.43e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.99e-14;42!CL:0002368;7.23e-14;13!CL:0002251;3.38e-09;20!CL:0002202;7.27e-09;9!CL:0002632;7.27e-09;9!CL:0000244;9.18e-07;4!CL:0000731;9.18e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.61e-27,253;CL:0002076,8.06e-18,42;CL:0002368,8.34e-14,13;CL:0000223,1.73e-13,58;CL:0002251,3.39e-09,20;CL:0002202,9.34e-09,9;CL:0002632,9.34e-09,9;CL:0000076,1.08e-07,63;CL:0000244,9.08e-07,4;CL:0000731,9.08e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.35e-09;29!CL:0000223;4.74e-08;58 | |||
|ontology_enrichment_disease=DOID:305!7.40e-11!106;DOID:1749!2.45e-09!14;DOID:0050687!2.93e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.08e-13;14!DOID:1036;2.51e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.47e-20,106;DOID:1749,1.16e-13,14;DOID:0050687,3.83e-13,143;DOID:162,6.29e-13,235;DOID:14566,2.70e-12,239;DOID:1036,3.43e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.71e-18!169;UBERON:0000925!5.71e-18!169;UBERON:0006595!5.71e-18!169;UBERON:0001004!1.75e-13!72;UBERON:0000065!2.80e-13!53;UBERON:0001007!7.02e-13!155;UBERON:0001555!7.02e-13!155;UBERON:0007026!7.02e-13!155;UBERON:0004921!4.08e-12!129;UBERON:0004185!4.08e-12!129;UBERON:0000072!5.67e-12!46;UBERON:0000077!5.28e-10!130;UBERON:0008947!4.46e-09!38;UBERON:0003258!4.46e-09!38;UBERON:0001557!7.86e-09!19;UBERON:0001737!2.19e-08!9;UBERON:0001041!1.84e-07!98;UBERON:0000063!1.95e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.80e-15;9!UBERON:0001557;8.80e-15;9!UBERON:0000072;5.87e-13;37!UBERON:0000065;1.02e-12;44!UBERON:0001004;1.26e-09;65!UBERON:0000486;8.52e-09;12!UBERON:0005910;9.69e-09;6!UBERON:0003343;6.34e-08;4!UBERON:0004785;6.34e-08;4!UBERON:0005911;7.14e-08;36!UBERON:0000365;9.46e-08;5!UBERON:0000344;1.23e-07;20!UBERON:0000974;2.77e-07;6!UBERON:0003729;3.89e-07;13!UBERON:0005631;4.09e-07;10!UBERON:0000158;4.09e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.69e-20,160;UBERON:0000925,2.69e-20,160;UBERON:0006595,2.69e-20,160;UBERON:0000065,9.70e-18,54;UBERON:0001004,1.75e-17,74;UBERON:0000072,2.67e-15,47;UBERON:0001737,1.14e-14,9;UBERON:0008947,3.40e-14,38;UBERON:0003258,3.40e-14,38;UBERON:0001007,9.42e-14,145;UBERON:0001555,9.42e-14,145;UBERON:0007026,9.42e-14,145;UBERON:0001557,4.99e-12,19;UBERON:0001041,7.87e-12,87;UBERON:0004921,9.36e-11,118;UBERON:0005910,5.52e-09,6;UBERON:0003343,6.38e-08,4;UBERON:0004785,6.38e-08,4;UBERON:0000365,7.12e-08,5;UBERON:0000344,1.11e-07,20;UBERON:0005631,1.75e-07,14;UBERON:0000158,1.75e-07,14;UBERON:0003729,3.91e-07,13;UBERON:0004871,7.41e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.31064823278103,2.63766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,6.43594857135249,3.614471025339,15.5296684270051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.0843174571537,0,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0.0654895377488563,2.91436230634034,8.52804218404188,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,4.79703457356788,0,0.12663051166458,0.132409180813219,0.860509862246441,0.354668382198357,1.12135520028461,1.06748995729705,0.49333509683432,1.55605517699883,0.538842688278752,0.817309515567294,0,0,0,0.936480230490962,1.1409436430889,0.597794722207204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0.423863802319124,0.600182192168805,0.412210116953756,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,2.89891279744945,3.00020732649918,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,6.15195360207188,6.23763353288976,7.71235295627142,6.28675644574646,5.44698610231015,5.45722423955522,3.37078270400411,4.70931516300831,5.00171304030308,0,0,0,1.47008711385542,0,0,0,0,0.983907508344908,0,4.93876284338815,8.99214026060957,3.61904300681871,2.87024179991442,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0.503946384596579,1.13420077793909,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0.771622122786426,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,1.50719688529793,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,1.5156378572313,0,1.20956117331872,0.496215615637554,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0.616838775210622,0.532685175939381,0.164254312027618,0.519254429183621,0.232420756919918,0.362578348774867,0.200506470303285,1.74953878978203,0.114814448164607,0.364182336013434,0.262248829918848,0,0.462092022626489,0,0,0.211103257785751,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0.831076008928724,1.56712328305525,0.219259876645935,0,1.02580050046556,0.328014645699706,1.30151357865721,0,0,0,0,1.95018073810956,1.6068392984416,0,0.924291702687866,1.38153307253517,0,0.429680979473094,0.725083469571143,0.767039646744908,0,5.95025695299521,2.49847087574638,4.8492830747942,2.52894452138875,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0.767693373934002,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0.294747123039363,0,0,0.633322905892992,0.329294892959902,0,0,13.2786515561207,3.35151137767894,19.6003772750381,0.188287601553558,3.44404298136984,5.05414427002877,5.76459199597678,1.37834040124176,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,8.63059139075251,0,0.270455678475983,0,0,3.55567026775618,0.146508179271894,0,0,0,8.59480145055684,4.15750553165694,8.90766036087773,0,0,0,0,0,0.19924798825107,0.552567831062295,0,2.55671706255387,0.123084805461069,0,4.04407580162971,0,0,0.394573622547734,0,0,0,0,0,0,0,0,5.00691172456199,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,5.66480010298749,6.97118721393016,0.307801034015188,0,0.46112780877612,0,0.434589487688032,4.14701507651495,0.549585560411174,1.5991043280559,0,0.470940769185074,2.49317522850235,5.41429585481234,8.03856390702732,5.03464760927528,8.15941050713996,1.11255605286265,0,0.652931232636591,0.141353071433941,0,0,0.530745387020035,1.22206028986725,1.77912677208373,0.988511511572023,0.730953646538188,0,0.802577647298789,0,0,9.78323094660449,0,0,0,0,0,5.41164309892173,1.14057010536972,0,0.661983911750998,0.627865836814451,0,6.26141001265544,0.138674673013139,0,4.60564267847575,0.34823682632161,1.39781334593624,0.171986032471617,5.51511088347785,2.70430473218887,5.09115833729897,1.45483524732629,0,0,0.548167698587004,0,0,2.15106521008283,3.84762337207362,0,3.79638258206047,1.29681375438695,0,0,7.05868510141934,9.31894016740744,8.72067928082143,0,0.209205692624666,0,1.44475294950759,0,0,0,0,3.15464825135177,0,0,0,0.798716001995964,0.858452096273142,0,0,0.720599767084807,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.449947783103001,0,0,6.37325906438606,0,0,1.47840471127169,0.35857467866569,6.90894710350003,0,0,0,0,0,0.979762080328227,0,4.76136620346166,1.02232813071253,0.566560457600628,0,0,0,0,0.17108683788432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| ||
|short_description=p@chr14:103018614..103018692,+ | |short_description=p@chr14:103018614..103018692,+ | ||
}} | }} |
Latest revision as of 18:12, 24 July 2015
Short description: | p@chr14:103018614..103018692, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:103018614..103018692, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.61e-27 | 253 |
endo-epithelial cell | 8.06e-18 | 42 |
respiratory epithelial cell | 8.34e-14 | 13 |
endodermal cell | 1.73e-13 | 58 |
epithelial cell of alimentary canal | 3.39e-09 | 20 |
epithelial cell of tracheobronchial tree | 9.34e-09 | 9 |
epithelial cell of lower respiratory tract | 9.34e-09 | 9 |
squamous epithelial cell | 1.08e-07 | 63 |
transitional epithelial cell | 9.08e-07 | 4 |
urothelial cell | 9.08e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.69e-20 | 160 |
endoderm | 2.69e-20 | 160 |
presumptive endoderm | 2.69e-20 | 160 |
respiratory tract | 9.70e-18 | 54 |
respiratory system | 1.75e-17 | 74 |
segment of respiratory tract | 2.67e-15 | 47 |
larynx | 1.14e-14 | 9 |
respiratory primordium | 3.40e-14 | 38 |
endoderm of foregut | 3.40e-14 | 38 |
digestive system | 9.42e-14 | 145 |
digestive tract | 9.42e-14 | 145 |
primitive gut | 9.42e-14 | 145 |
upper respiratory tract | 4.99e-12 | 19 |
foregut | 7.87e-12 | 87 |
subdivision of digestive tract | 9.36e-11 | 118 |
transitional epithelium | 5.52e-09 | 6 |
mucosa of oral region | 6.38e-08 | 4 |
respiratory system mucosa | 6.38e-08 | 4 |
urothelium | 7.12e-08 | 5 |
mucosa | 1.11e-07 | 20 |
extraembryonic membrane | 1.75e-07 | 14 |
membranous layer | 1.75e-07 | 14 |
mouth mucosa | 3.91e-07 | 13 |
somatic layer of lateral plate mesoderm | 7.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.47e-20 | 106 |
squamous cell carcinoma | 1.16e-13 | 14 |
cell type cancer | 3.83e-13 | 143 |
cancer | 6.29e-13 | 235 |
disease of cellular proliferation | 2.70e-12 | 239 |
chronic leukemia | 3.43e-07 | 8 |