FFCP PHASE1:Hg19::chr14:104698008..104698020,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:104698008..104698020,+ to FFCP PHASE1:Hg19::chr14:104698008..104698020,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:104698008..104698020,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr14:104698008..104698020,+ | |||
|id=chr14:104698008..104698020,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.81e-23;5!CL:0002321;1.65e-08;15!CL:0000243;1.29e-07;15!CL:0000125;1.29e-07;15!CL:0000095;6.57e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,5.30e-11,41;CL:0000133,6.88e-08,59;CL:0000243,1.38e-07,15;CL:0000125,1.38e-07,15;CL:0000030,1.38e-07,15;CL:0000339,1.38e-07,15;CL:0000095,6.97e-07,17;CL:0000123,6.97e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.98e-11;10!UBERON:0003056;9.90e-11;3!CL:0000339;1.29e-07;15 | |||
|ontology_enrichment_disease=DOID:3095!5.81e-11!22;DOID:2994!5.81e-11!22;DOID:171!2.94e-10!10;DOID:169!2.22e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;9.49e-20;6!DOID:171;2.81e-12;10!DOID:3093;2.13e-10;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.13e-20,6;DOID:171,2.37e-12,10;DOID:3093,2.34e-10,11 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.09e-18!115;UBERON:0000073!5.11e-18!94;UBERON:0001016!5.11e-18!94;UBERON:0001049!4.73e-17!57;UBERON:0005068!4.73e-17!57;UBERON:0006241!4.73e-17!57;UBERON:0007135!4.73e-17!57;UBERON:0002780!1.99e-16!41;UBERON:0001890!1.99e-16!41;UBERON:0006240!1.99e-16!41;UBERON:0002616!2.74e-16!59;UBERON:0000955!4.61e-16!69;UBERON:0006238!4.61e-16!69;UBERON:0003080!6.16e-16!42;UBERON:0002346!5.67e-15!90;UBERON:0005743!2.18e-14!86;UBERON:0001017!6.26e-14!82;UBERON:0003075!3.27e-13!86;UBERON:0007284!3.27e-13!86;UBERON:0003056!1.37e-12!61;UBERON:0003296!1.45e-12!4;UBERON:0010133!1.45e-12!4;UBERON:0002020!9.98e-12!34;UBERON:0003528!9.98e-12!34;UBERON:0001893!1.65e-11!34;UBERON:0002791!3.57e-10!33;UBERON:0000013!4.47e-10!5;UBERON:0002410!4.47e-10!5;UBERON:0000988!3.21e-09!3;UBERON:0006331!4.86e-09!3;UBERON:0001869!5.69e-09!32;UBERON:0000924!1.08e-08!173;UBERON:0006601!1.08e-08!173;UBERON:0002298!1.20e-08!8;UBERON:0002619!7.41e-08!22;UBERON:0004121!1.47e-07!169;UBERON:0001905!1.99e-07!2;UBERON:0002757!1.99e-07!2;UBERON:0010134!1.99e-07!2;UBERON:0002784!1.99e-07!2;UBERON:0005408!1.99e-07!2;UBERON:0001899!1.99e-07!2;UBERON:0000033!2.15e-07!123;UBERON:0002308!2.89e-07!9;UBERON:0000125!2.89e-07!9;UBERON:0001894!3.86e-07!7;UBERON:0006222!3.86e-07!7;UBERON:0001630!4.97e-07!2;UBERON:0005090!4.97e-07!2;UBERON:0001950!8.23e-07!20;UBERON:0000007!8.34e-07!2;UBERON:0000153!8.51e-07!129;UBERON:0007811!8.51e-07!129;UBERON:0000956!9.22e-07!25;UBERON:0000203!9.22e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000013;1.81e-23;5!UBERON:0002410;1.81e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0000010;1.58e-13;8!UBERON:0000966;6.04e-07;5!UBERON:0005388;6.04e-07;5!UBERON:0001802;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0000013,1.28e-23,5;UBERON:0002410,1.28e-23,5;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000010,1.31e-13,8;UBERON:0001016,2.47e-11,89;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.874813840149763,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.310482014706917,1.10678907948985,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,1.94084660514027,0.786329709279482,1.52893493468819,0.848662649770126,0,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0,0,0,4.82131652290458,18.4956047220353,0.606965604236632,0.455324382702595,0,0,0,0.543757863814654,0,0,0,0,0,0,0.913158720509496,0,0,0.857718530119876,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0.647428837187895,0,1.1598144313382,0,0,0.198950775161368,0,0,0.439762066981716,0.905777061400041,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0.187967835959707,0.515663103788617,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.874813840149763,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.310482014706917,1.10678907948985,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,1.94084660514027,0.786329709279482,1.52893493468819,0.848662649770126,0,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0,0,0,4.82131652290458,18.4956047220353,0.606965604236632,0.455324382702595,0,0,0,0.543757863814654,0,0,0,0,0,0,0.913158720509496,0,0,0.857718530119876,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0.647428837187895,0,1.1598144313382,0,0,0.198950775161368,0,0,0.439762066981716,0.905777061400041,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0.187967835959707,0.515663103788617,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr14:104698008..104698020,+ | |||
}} | }} |
Latest revision as of 18:24, 24 July 2015
Short description: | p@chr14:104698008..104698020, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:104698008..104698020, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 5.30e-11 | 41 |
neurectodermal cell | 6.88e-08 | 59 |
glial cell (sensu Vertebrata) | 1.38e-07 | 15 |
glial cell | 1.38e-07 | 15 |
glioblast | 1.38e-07 | 15 |
glioblast (sensu Vertebrata) | 1.38e-07 | 15 |
neuron associated cell | 6.97e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.97e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
sympathetic nervous system | 1.28e-23 | 5 |
autonomic nervous system | 1.28e-23 | 5 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
peripheral nervous system | 1.31e-13 | 8 |
nervous system | 2.47e-11 | 89 |
brain | 5.93e-07 | 68 |
future brain | 5.93e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.13e-20 | 6 |
neuroectodermal tumor | 2.37e-12 | 10 |
nervous system cancer | 2.34e-10 | 11 |