FFCP PHASE1:Hg19::chr14:24050941..24050946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:24050941..24050946,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr14:24050941..24050946,+ | |description=CAGE_peak_at_chr14:24050941..24050946,+ | ||
|id=chr14:24050941..24050946,+ | |id=chr14:24050941..24050946,+ | ||
|ontology_enrichment_celltype=CL:0002553!3.95e-07!1;CL:0002379!5.26e-07!1 | |ontology_enrichment_celltype=CL:0002553!3.95e-07!1;CL:0002379!5.26e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002553;7.62e-26;1!CL:0000182;1.87e-19;12!CL:0000322;1.30e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.62e-26,1;CL:0000182,1.87e-19,12;CL:0000322,1.30e-09,3;CL:0000223,2.54e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.79e-21;11!UBERON:0001041;5.59e-21;30!UBERON:0009497;5.11e-18;13!UBERON:0003104;3.60e-13;31 | |||
|ontology_enrichment_disease=DOID:162!3.58e-16!235;DOID:14566!1.05e-15!239;DOID:0050687!8.60e-10!143;DOID:305!3.12e-07!106;DOID:3620!5.26e-07!1;DOID:3565!5.26e-07!1;DOID:0060085!5.89e-07!1;DOID:3165!5.89e-07!1;DOID:0060121!5.89e-07!1;DOID:2438!5.89e-07!1;DOID:4418!5.89e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3910;9.40e-14;2!DOID:1324;1.44e-07;15!DOID:0050615;3.78e-07;16!DOID:7;9.06e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,9.40e-14,2;DOID:0050687,1.64e-08,143;DOID:1324,1.44e-07,15;DOID:0050615,3.78e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0002368!9.21e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.40e-14;2!UBERON:0002173;9.40e-14;2!UBERON:0002186;9.40e-14;2!UBERON:0002107;1.45e-12;19!UBERON:0006925;1.45e-12;19!UBERON:0002423;1.04e-09;25!UBERON:0004821;1.30e-09;3!UBERON:0007499;1.30e-09;3!UBERON:0003215;1.30e-09;3!UBERON:0010368;1.30e-09;3!UBERON:0009911;1.30e-09;3!UBERON:0002299;1.30e-09;3!UBERON:0006524;1.30e-09;3!UBERON:0008874;1.30e-09;3!UBERON:0002169;1.30e-09;3!UBERON:0004894;1.30e-09;3!UBERON:0009856;1.59e-07;4!UBERON:0002365;2.09e-07;31!UBERON:0002330;2.09e-07;31!UBERON:0002368;5.25e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,1.95e-16,25;UBERON:0009856,8.00e-16,26;UBERON:0004903,9.40e-14,2;UBERON:0002173,9.40e-14,2;UBERON:0002186,9.40e-14,2;UBERON:0002107,1.45e-12,19;UBERON:0006925,1.45e-12,19;UBERON:0008836,1.45e-12,19;UBERON:0008835,6.05e-11,22;UBERON:0003894,6.05e-11,22;UBERON:0009854,1.69e-10,23;UBERON:0009497,1.04e-09,25;UBERON:0000015,1.04e-09,25;UBERON:0002423,1.04e-09,25;UBERON:0006235,1.04e-09,25;UBERON:0004161,1.04e-09,25;UBERON:0004821,1.30e-09,3;UBERON:0003215,1.30e-09,3;UBERON:0010368,1.30e-09,3;UBERON:0009911,1.30e-09,3;UBERON:0002299,1.30e-09,3;UBERON:0006524,1.30e-09,3;UBERON:0008874,1.30e-09,3;UBERON:0002169,1.30e-09,3;UBERON:0004894,1.30e-09,3;UBERON:0005177,5.96e-09,101;UBERON:0009569,4.50e-08,112;UBERON:0002365,5.94e-08,31;UBERON:0002330,5.94e-08,31;UBERON:0005911,7.83e-08,82;UBERON:0005172,8.31e-08,54;UBERON:0005173,8.31e-08,54;UBERON:0001041,2.16e-07,87;UBERON:0002368,4.12e-07,35;UBERON:0002417,4.63e-07,60;UBERON:0000916,4.63e-07,60 | |||
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|short_description=p@chr14:24050941..24050946,+ | |short_description=p@chr14:24050941..24050946,+ | ||
}} | }} |
Latest revision as of 19:44, 24 July 2015
Short description: | p@chr14:24050941..24050946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:24050941..24050946, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.62e-26 | 1 |
hepatocyte | 1.87e-19 | 12 |
pneumocyte | 1.30e-09 | 3 |
endodermal cell | 2.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 1.95e-16 | 25 |
sac | 8.00e-16 | 26 |
bronchoalveolar duct junction | 9.40e-14 | 2 |
alveolar duct | 9.40e-14 | 2 |
bronchiole | 9.40e-14 | 2 |
liver | 1.45e-12 | 19 |
digestive gland | 1.45e-12 | 19 |
liver bud | 1.45e-12 | 19 |
hepatic diverticulum | 6.05e-11 | 22 |
liver primordium | 6.05e-11 | 22 |
digestive tract diverticulum | 1.69e-10 | 23 |
epithelium of foregut-midgut junction | 1.04e-09 | 25 |
anatomical boundary | 1.04e-09 | 25 |
hepatobiliary system | 1.04e-09 | 25 |
foregut-midgut junction | 1.04e-09 | 25 |
septum transversum | 1.04e-09 | 25 |
pulmonary alveolus epithelium | 1.30e-09 | 3 |
alveolus | 1.30e-09 | 3 |
pulmonary lobule | 1.30e-09 | 3 |
lobule | 1.30e-09 | 3 |
alveolus of lung | 1.30e-09 | 3 |
alveolar system | 1.30e-09 | 3 |
pulmonary acinus | 1.30e-09 | 3 |
alveolar sac | 1.30e-09 | 3 |
alveolar wall | 1.30e-09 | 3 |
trunk region element | 5.96e-09 | 101 |
subdivision of trunk | 4.50e-08 | 112 |
exocrine gland | 5.94e-08 | 31 |
exocrine system | 5.94e-08 | 31 |
endo-epithelium | 7.83e-08 | 82 |
abdomen element | 8.31e-08 | 54 |
abdominal segment element | 8.31e-08 | 54 |
foregut | 2.16e-07 | 87 |
endocrine gland | 4.12e-07 | 35 |
abdominal segment of trunk | 4.63e-07 | 60 |
abdomen | 4.63e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.40e-14 | 2 |
cell type cancer | 1.64e-08 | 143 |
lung cancer | 1.44e-07 | 15 |
respiratory system cancer | 3.78e-07 | 16 |