FFCP PHASE1:Hg19::chr14:50443908..50443920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:50443908..50443920,+ | |||
|coexpression_cluster_id=C1103 | |coexpression_cluster_id=C1103 | ||
|description=CAGE_peak_at_chr14:50443908..50443920,+ | |description=CAGE_peak_at_chr14:50443908..50443920,+ | ||
|id=chr14:50443908..50443920,+ | |id=chr14:50443908..50443920,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.15e-47!140;CL:0002087!1.72e-46!119;CL:0002031!2.15e-43!124;CL:0000037!8.84e-40!172;CL:0000566!8.84e-40!172;CL:0002032!1.55e-38!165;CL:0000837!1.55e-38!165;CL:0000988!3.46e-36!182;CL:0000838!3.43e-30!52;CL:0000542!2.20e-29!53;CL:0000051!2.20e-29!53;CL:0000945!7.93e-20!24;CL:0000826!7.93e-20!24;CL:0000791!2.16e-15!18;CL:0000789!2.16e-15!18;CL:0002420!2.16e-15!18;CL:0002419!2.16e-15!18;CL:0000790!2.16e-15!18;CL:0002009!2.54e-15!65;CL:0000557!2.63e-15!71;CL:0002194!5.18e-15!63;CL:0000576!5.18e-15!63;CL:0000040!5.18e-15!63;CL:0000559!5.18e-15!63;CL:0002057!6.61e-15!42;CL:0000839!1.24e-14!70;CL:0000766!1.36e-14!76;CL:0000236!7.18e-14!14;CL:0000860!2.04e-13!45;CL:0000763!3.79e-13!112;CL:0000049!3.79e-13!112;CL:0000084!3.69e-11!25;CL:0000827!3.69e-11!25;CL:0000625!1.11e-09!11;CL:0000624!1.06e-08!6;CL:0000134!3.14e-07!358;CL:0002320!9.84e-07!365 | |ontology_enrichment_celltype=CL:0000738!2.15e-47!140;CL:0002087!1.72e-46!119;CL:0002031!2.15e-43!124;CL:0000037!8.84e-40!172;CL:0000566!8.84e-40!172;CL:0002032!1.55e-38!165;CL:0000837!1.55e-38!165;CL:0000988!3.46e-36!182;CL:0000838!3.43e-30!52;CL:0000542!2.20e-29!53;CL:0000051!2.20e-29!53;CL:0000945!7.93e-20!24;CL:0000826!7.93e-20!24;CL:0000791!2.16e-15!18;CL:0000789!2.16e-15!18;CL:0002420!2.16e-15!18;CL:0002419!2.16e-15!18;CL:0000790!2.16e-15!18;CL:0002009!2.54e-15!65;CL:0000557!2.63e-15!71;CL:0002194!5.18e-15!63;CL:0000576!5.18e-15!63;CL:0000040!5.18e-15!63;CL:0000559!5.18e-15!63;CL:0002057!6.61e-15!42;CL:0000839!1.24e-14!70;CL:0000766!1.36e-14!76;CL:0000236!7.18e-14!14;CL:0000860!2.04e-13!45;CL:0000763!3.79e-13!112;CL:0000049!3.79e-13!112;CL:0000084!3.69e-11!25;CL:0000827!3.69e-11!25;CL:0000625!1.11e-09!11;CL:0000624!1.06e-08!6;CL:0000134!3.14e-07!358;CL:0002320!9.84e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.71e-30;13!CL:0000945;1.80e-27;24!CL:0000542;1.80e-18;53!CL:0000791;6.48e-12;18!CL:0000789;6.48e-12;18!CL:0002419;6.48e-12;18!CL:0000624;3.93e-08;6!CL:0000084;4.04e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.04e-29,52;CL:0000542,2.82e-28,53;CL:0000051,2.82e-28,53;CL:0000945,1.65e-27,24;CL:0000826,1.65e-27,24;CL:0000236,1.66e-27,14;CL:0000738,6.60e-20,136;CL:0002087,4.84e-19,115;CL:0002031,5.93e-18,120;CL:0000037,1.98e-14,168;CL:0002032,2.16e-14,161;CL:0000837,2.16e-14,161;CL:0000988,2.98e-13,177;CL:0000791,7.92e-12,18;CL:0000789,7.92e-12,18;CL:0002420,7.92e-12,18;CL:0002419,7.92e-12,18;CL:0000790,7.92e-12,18;CL:0000624,4.38e-08,6;CL:0000084,4.63e-08,25;CL:0000827,4.63e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.80e-18;53!CL:0000790;6.48e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.67e-22!102;UBERON:0003061!3.67e-22!102;UBERON:0002193!3.08e-21!112;UBERON:0002371!1.83e-12!80;UBERON:0001474!6.32e-11!86;UBERON:0002405!1.06e-10!115;UBERON:0000178!1.15e-08!15;UBERON:0000179!1.15e-08!15;UBERON:0000463!1.15e-08!15;UBERON:0004765!5.86e-08!101;UBERON:0001434!5.86e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!3.67e-22!102;UBERON:0003061!3.67e-22!102;UBERON:0002193!3.08e-21!112;UBERON:0002371!1.83e-12!80;UBERON:0001474!6.32e-11!86;UBERON:0002405!1.06e-10!115;UBERON:0000178!1.15e-08!15;UBERON:0000179!1.15e-08!15;UBERON:0000463!1.15e-08!15;UBERON:0004765!5.86e-08!101;UBERON:0001434!5.86e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.23e-11;15!UBERON:0000179;2.23e-11;15!UBERON:0000463;2.23e-11;15!UBERON:0002390;3.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.92e-11,15;UBERON:0000179,1.92e-11,15;UBERON:0000463,1.92e-11,15;UBERON:0002193,7.08e-07,108 | |||
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|short_description=p@chr14:50443908..50443920,+ | |short_description=p@chr14:50443908..50443920,+ | ||
}} | }} |
Latest revision as of 20:50, 24 July 2015
Short description: | p@chr14:50443908..50443920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:50443908..50443920, + |
Coexpression cluster: | C1103_CD19_CD4_CD8_Whole_blood_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.04e-29 | 52 |
lymphocyte | 2.82e-28 | 53 |
common lymphoid progenitor | 2.82e-28 | 53 |
lymphocyte of B lineage | 1.65e-27 | 24 |
pro-B cell | 1.65e-27 | 24 |
B cell | 1.66e-27 | 14 |
leukocyte | 6.60e-20 | 136 |
nongranular leukocyte | 4.84e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.93e-18 | 120 |
hematopoietic stem cell | 1.98e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-14 | 161 |
hematopoietic cell | 2.98e-13 | 177 |
mature alpha-beta T cell | 7.92e-12 | 18 |
alpha-beta T cell | 7.92e-12 | 18 |
immature T cell | 7.92e-12 | 18 |
mature T cell | 7.92e-12 | 18 |
immature alpha-beta T cell | 7.92e-12 | 18 |
CD4-positive, alpha-beta T cell | 4.38e-08 | 6 |
T cell | 4.63e-08 | 25 |
pro-T cell | 4.63e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 1.92e-11 | 15 |
haemolymphatic fluid | 1.92e-11 | 15 |
organism substance | 1.92e-11 | 15 |
hemolymphoid system | 7.08e-07 | 108 |