FFCP PHASE1:Hg19::chr15:39872597..39872634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39872597..39872634,+ | |||
|description=CAGE_peak_at_chr15:39872597..39872634,+ | |description=CAGE_peak_at_chr15:39872597..39872634,+ | ||
|id=chr15:39872597..39872634,+ | |id=chr15:39872597..39872634,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.22e-14!42;CL:0000860!6.69e-12!45;CL:0002371!3.47e-08!591;CL:0000057!1.35e-07!75 | |ontology_enrichment_celltype=CL:0002057!3.22e-14!42;CL:0000860!6.69e-12!45;CL:0002371!3.47e-08!591;CL:0000057!1.35e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-17;33!CL:0002057;1.12e-17;33!CL:0000473;6.65e-11;39!CL:0000234;6.65e-11;39!CL:0000576;4.73e-10;48!CL:0000766;7.56e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-18,42;CL:0002057,1.64e-18,42;CL:0000473,2.03e-14,48;CL:0000234,2.03e-14,48;CL:0000766,1.02e-11,72;CL:0002194,1.92e-10,59;CL:0000576,1.92e-10,59;CL:0000040,1.92e-10,59;CL:0000559,1.92e-10,59;CL:0002009,1.08e-09,61;CL:0000557,1.56e-08,67;CL:0000839,4.62e-08,66;CL:0000723,1.01e-07,433;CL:0000034,2.97e-07,441;CL:0000134,3.08e-07,354;CL:0000048,3.26e-07,427;CL:0000057,4.82e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.44e-08!216;UBERON:0000468!6.49e-08!659;UBERON:0000480!2.58e-07!626;UBERON:0000467!3.02e-07!625 | |ontology_enrichment_uberon=UBERON:0003081!2.44e-08!216;UBERON:0000468!6.49e-08!659;UBERON:0000480!2.58e-07!626;UBERON:0000467!3.02e-07!625 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,8.79e-12,203;UBERON:0002193,3.51e-08,108;UBERON:0002390,1.10e-07,98;UBERON:0003061,1.10e-07,98;UBERON:0002405,2.03e-07,93;UBERON:0002371,2.05e-07,76;UBERON:0001474,8.09e-07,82;UBERON:0002384,8.32e-07,371 | |||
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|phase1_expression=5.08699461957559,4.06790995392868,2.39622486963151,2.00146596706261,1.34088328328186,2.61701557230111,0,0.631719873426831,0.522371256399677,0.737201809504527,0.697801167972428,2.40285509343189,1.05506791291381,0.618831764800233,0.662794751455832,0.672325146451775,0.602694528023977,0,2.43966399395253,0.123121058076788,1.22400414746552,0.313454721478088,0.572471974262113,0.273748850145768,0.753255837568817,0,0.0821005894499457,0,4.72037132218685,5.37361157336098,12.0756576186539,2.75826367343678,0.90361775633475,0,0,0,0.293600439334847,18.281848481552,31.2849338053421,6.72733699219141,1.56740831967947,0.971680998056939,0.77272670290256,5.67053131240302,2.26725566213286,0.727752183563449,11.3890228083785,2.46700732813095,1.54853185447552,8.63077176966451,2.56160706529101,1.41889337933151,8.96338769915208,1.29096936716765,0,7.52969358170419,2.72906150057846,1.34834090667051,11.9372718024652,5.1348644332175,1.27867425159808,9.56568770541477,3.59034583718937,2.13112375266347,15.0908804086864,5.10646702222026,2.4912889959823,10.0499466102697,4.17186334736161,2.38907729175628,15.1349875658342,2.20966581592539,1.58231193720442,0.633765858935825,2.12604299965044,0.628975936525128,8.53697596713363,9.16079046333189,1.76798145366788,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,3.36305137788922,0.263384084775077,0.590129310341499,0.393010762749165,0.411202997999018,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0.766440987203842,0,0.506039384039006,0.318565414324097,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0,1.61285394579786,1.06976078313403,1.30341963494519,0,0,0.639312809217652,1.44575660953827,0,0.724232594804119,0.795285947051099,1.45990461090791,0.283604451492204,1.10864698731282,0.87834785693126,0.72038491523742,0.728590576585084,0.741568885568859,0,0,0,0.238490624305342,0.571994910780128,0,0.993812036833525,0.860234595106124,3.81854551768354,3.95715559346807,1.25849830862972,1.37559020970034,0.835979866147242,1.29208379584664,0.71153252537342,2.67776490211736,1.20848795132744,0,0.976248230192678,1.10298924103761,4.86085168729056,1.07159673940896,0.673588117878509,1.57656072676651,0,3.79706263827252,1.28241220751285,2.63560834872127,3.87780264148325,0,6.46063537203914,1.8994576749687,4.8991396900891,1.14734648299525,1.77334191099179,0.560677600142307,2.1349799145941,3.7000132262574,1.55605517699883,0.67355336034844,0.490385709340376,0.605429710579726,0,0.234321431833797,0,0,0.448346041655403,0.352303495931295,0.485618833104395,0.561803226808994,0.816616685019573,0.61417158655884,0.826606249406124,2.37600571456411,2.47266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0,1.10825646193673,0.438977620880838,3.0648779579902,3.60571341375832,0.340296549480063,4.30535125653269,4.69826255400848,1.05965950579781,2.70081986475962,1.44273540933814,3.09168648054755,1.67505170698431,2.36286865137773,1.07180705677318,3.5340728394176,2.76149695926898,1.77810662500693,4.9701342952326,1.61203357164224,1.18692414617341,1.35282597214308,0.818238361772504,0.860413786167011,0.365921118388786,0.397589304964456,0.232387885739037,0.10366105501537,0.252320850875628,0.72995471815166,1.56449532329816,1.28648187638577,0,0.928735856063958,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.588664395376038,0.38474715694639,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0.441463099414651,0.245976877086227,0.514703430895577,1.20725313949488,0,0.502644862058154,1.38882667737794,0,0,0,0.579652024875384,0.587043471179108,2.16549671641611,2.77791307545966,3.04406643575357,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,3.02367830757947,0.708875486211932,1.16426079513703,1.74380363108377,3.06706143332169,0,0.088048434013226,0.207328115540772,0.432359860250884,0,0.063497894292169,0,0,1.71072446022705,0.411309970813294,0,0,0.224262168690721,0,0.4400297149257,2.45616259939778,3.57656445851882,0,0.797814349754612,0,0,0,0.532844358032199,1.57275793023962,0.542621605391443,0,0.325736184293735,0.710783897485092,0.791951872933429,0,0.871533458600294,0.499864955910285,0,0,0,1.4377491329495,1.14861935834114,0,0.723906533337896,0.410952645100767,0.537182889719687,1.34502172792233,1.57624608161542,2.15627574859517,1.92514554419623,0,0,0,6.03058555203656,1.27587750330633,2.24702107184155,0,1.65766205374414,0.49076596687656,0,0.271265023699736,2.28767947683888,1.60586089917446,3.6271555457805,3.98280810975225,2.40756879782175,4.5481500811197,0,1.32845119707087,1.29058417979192,0.434418072340414,0.783204629850962,0.343143423810856,6.20304078368662,4.96142661882819,3.62873696531711,1.81876542867756,1.66435439510497,1.5119514666484,5.45837177201309,6.75232682467475,3.08726103876381,2.94720043288112,4.09365799253363,3.05622450172854,1.48418066444991,0.616838775210622,1.59805552781814,0.821271560138091,1.55776328755086,0.464841513839837,0.362578348774867,2.20557117333613,0.276242966807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| ||
|short_description=p@chr15:39872597..39872634,+ | |short_description=p@chr15:39872597..39872634,+ | ||
}} | }} |
Latest revision as of 01:12, 25 July 2015
Short description: | p@chr15:39872597..39872634, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39872597..39872634, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-18 | 42 |
defensive cell | 2.03e-14 | 48 |
phagocyte | 2.03e-14 | 48 |
myeloid leukocyte | 1.02e-11 | 72 |
monopoietic cell | 1.92e-10 | 59 |
monocyte | 1.92e-10 | 59 |
monoblast | 1.92e-10 | 59 |
promonocyte | 1.92e-10 | 59 |
macrophage dendritic cell progenitor | 1.08e-09 | 61 |
granulocyte monocyte progenitor cell | 1.56e-08 | 67 |
myeloid lineage restricted progenitor cell | 4.62e-08 | 66 |
somatic stem cell | 1.01e-07 | 433 |
stem cell | 2.97e-07 | 441 |
mesenchymal cell | 3.08e-07 | 354 |
multi fate stem cell | 3.26e-07 | 427 |
fibroblast | 4.82e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 8.79e-12 | 203 |
hemolymphoid system | 3.51e-08 | 108 |
hematopoietic system | 1.10e-07 | 98 |
blood island | 1.10e-07 | 98 |
immune system | 2.03e-07 | 93 |
bone marrow | 2.05e-07 | 76 |
bone element | 8.09e-07 | 82 |
connective tissue | 8.32e-07 | 371 |