FFCP PHASE1:Hg19::chr15:68124362..68124376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:68124362..68124376,+ | |||
|coexpression_cluster_id=C321 | |coexpression_cluster_id=C321 | ||
|description=CAGE_peak_at_chr15:68124362..68124376,+ | |description=CAGE_peak_at_chr15:68124362..68124376,+ | ||
|id=chr15:68124362..68124376,+ | |id=chr15:68124362..68124376,+ | ||
|ontology_enrichment_celltype=CL:0000123;7.05e-34;2!CL:0000242;7.05e-34;2!CL:0000214;2.62e-23;3!CL:0000312;1.83e-14;5!CL:0000240;2.74e-12;6!CL:0000311;2.74e-12;6!CL:0000079;2.74e-12;6!CL:0000237;2.74e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000362;1.21e-08;9 | |ontology_enrichment_celltype=CL:0000242!1.54e-15!2;CL:0000214!6.73e-11!3;CL:0000312!5.38e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000123;7.05e-34;2!CL:0000242;7.05e-34;2!CL:0000214;2.62e-23;3!CL:0000312;1.83e-14;5!CL:0000240;2.74e-12;6!CL:0000311;2.74e-12;6!CL:0000079;2.74e-12;6!CL:0000237;2.74e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000362;1.21e-08;9 | ||
|ontology_enrichment_disease=DOID:1115;2.41e-14;20 | |ontology_enrichment_celltype_v019_2=CL:0000242,7.05e-34,2;CL:0000214,2.62e-23,3;CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9;CL:0000362,1.21e-08,9 | ||
|ontology_enrichment_uberon=UBERON:0006915;2.62e-23;3!UBERON:0007616;2.62e-23;3!UBERON:0002217;2.62e-23;3!UBERON:0002018;2.62e-23;3!UBERON:0004905;1.24e-09;8!UBERON:0000982;1.24e-09;8!UBERON:0004770;1.24e-09;8!UBERON:0004457;1.04e-08;9!UBERON:0000042;1.04e-08;9!UBERON:0000486;7.48e-07;12 | |ontology_enrichment_development_v019=CL:0000357;2.74e-12;6!CL:0000114;2.74e-12;6 | ||
|ontology_enrichment_disease=DOID:12603!2.37e-29!1 | |||
|ontology_enrichment_disease_v019=DOID:1115;2.41e-14;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,2.41e-14,20 | |||
|ontology_enrichment_uberon=UBERON:0002022!4.20e-29!1;UBERON:0006915!6.73e-11!3;UBERON:0002018!6.73e-11!3;UBERON:0002217!6.73e-11!3;UBERON:0007616!6.73e-11!3;UBERON:0004905!4.79e-07!5;UBERON:0000982!4.79e-07!5;UBERON:0004770!4.79e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.62e-23;3!UBERON:0007616;2.62e-23;3!UBERON:0002217;2.62e-23;3!UBERON:0002018;2.62e-23;3!UBERON:0004905;1.24e-09;8!UBERON:0000982;1.24e-09;8!UBERON:0004770;1.24e-09;8!UBERON:0004457;1.04e-08;9!UBERON:0000042;1.04e-08;9!UBERON:0000486;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.62e-23,3;UBERON:0007616,2.62e-23,3;UBERON:0002217,2.62e-23,3;UBERON:0002018,2.62e-23,3;UBERON:0004905,1.24e-09,8;UBERON:0000982,1.24e-09,8;UBERON:0004770,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12 | |||
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|short_description=p@chr15:68124362..68124376,+ | |short_description=p@chr15:68124362..68124376,+ | ||
}} | }} |
Latest revision as of 03:40, 25 July 2015
Short description: | p@chr15:68124362..68124376, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68124362..68124376, + |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.05e-34 | 2 |
synovial cell | 2.62e-23 | 3 |
keratinocyte | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
epidermal cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.62e-23 | 3 |
layer of synovial tissue | 2.62e-23 | 3 |
synovial joint | 2.62e-23 | 3 |
synovial membrane of synovial joint | 2.62e-23 | 3 |
articulation | 1.24e-09 | 8 |
skeletal joint | 1.24e-09 | 8 |
articular system | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 2.41e-14 | 20 |