FFCP PHASE1:Hg19::chr16:11643374..11643388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:11643374..11643388,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr16:11643374..11643388,- | |description=CAGE_peak_at_chr16:11643374..11643388,- | ||
|id=chr16:11643374..11643388,- | |id=chr16:11643374..11643388,- | ||
|ontology_enrichment_celltype=CL:0000766!2.69e-18!76;CL:0000738!1.41e-17!140;CL:0000860!1.12e-16!45;CL:0002057!1.74e-16!42;CL:0002194!1.42e-15!63;CL:0000576!1.42e-15!63;CL:0000040!1.42e-15!63;CL:0000559!1.42e-15!63;CL:0002009!1.59e-15!65;CL:0002087!1.89e-15!119;CL:0000557!1.56e-14!71;CL:0002031!2.83e-14!124;CL:0000839!4.94e-14!70;CL:0000037!1.76e-10!172;CL:0000566!1.76e-10!172;CL:0002032!2.26e-10!165;CL:0000837!2.26e-10!165;CL:0000988!8.47e-10!182;CL:0000763!7.14e-09!112;CL:0000049!7.14e-09!112 | |ontology_enrichment_celltype=CL:0000766!2.69e-18!76;CL:0000738!1.41e-17!140;CL:0000860!1.12e-16!45;CL:0002057!1.74e-16!42;CL:0002194!1.42e-15!63;CL:0000576!1.42e-15!63;CL:0000040!1.42e-15!63;CL:0000559!1.42e-15!63;CL:0002009!1.59e-15!65;CL:0002087!1.89e-15!119;CL:0000557!1.56e-14!71;CL:0002031!2.83e-14!124;CL:0000839!4.94e-14!70;CL:0000037!1.76e-10!172;CL:0000566!1.76e-10!172;CL:0002032!2.26e-10!165;CL:0000837!2.26e-10!165;CL:0000988!8.47e-10!182;CL:0000763!7.14e-09!112;CL:0000049!7.14e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.38e-36;33!CL:0002057;5.38e-36;33!CL:0000473;2.52e-29;39!CL:0000234;2.52e-29;39!CL:0000576;8.87e-19;48!CL:0000766;1.03e-15;69!CL:0000775;4.51e-12;3!CL:0000094;2.61e-11;8!CL:0000081;3.35e-11;11!CL:0000763;6.13e-09;100!CL:0000771;5.56e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.52e-38,48;CL:0000234,4.52e-38,48;CL:0000766,2.00e-37,72;CL:0000860,4.48e-37,42;CL:0002057,4.48e-37,42;CL:0002194,1.29e-31,59;CL:0000576,1.29e-31,59;CL:0000040,1.29e-31,59;CL:0000559,1.29e-31,59;CL:0002009,2.26e-30,61;CL:0000839,1.37e-27,66;CL:0000557,4.40e-27,67;CL:0000763,2.27e-22,108;CL:0000049,2.27e-22,108;CL:0000738,3.00e-20,136;CL:0002087,4.76e-17,115;CL:0002031,4.84e-16,120;CL:0002032,8.35e-16,161;CL:0000837,8.35e-16,161;CL:0000037,8.42e-15,168;CL:0000988,1.16e-14,177;CL:0000775,4.47e-12,3;CL:0000094,2.55e-11,8;CL:0000081,4.15e-11,11;CL:0000771,5.40e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-29;42!CL:0000049;4.35e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;2.14e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.73e-08,2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.76e-23,98;UBERON:0003061,2.76e-23,98;UBERON:0002371,4.07e-23,76;UBERON:0002193,4.03e-22,108;UBERON:0001474,5.91e-21,82;UBERON:0002405,2.19e-19,93;UBERON:0004765,1.60e-18,90;UBERON:0001434,4.97e-16,100;UBERON:0003081,7.72e-10,203;UBERON:0002204,1.06e-08,167 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0.840547463227464,0.246301768349837,0.472264687882075,0.393364276848904,0.383829398097213,0,0,0.6024118375565,1.47901604066715,0.0774672005803016,0,0,0,1.20326668482085,0.217010870715852,0.895661896959697,0,0.257575567634187,1.74477886535478,1.13362783106643,0.242584061187816,1.85943229524548,0.411167888021826,1.54853185447552,3.74000110018796,2.81776777182011,2.83778675866302,2.06847408441971,0.645484683583826,0,2.44715041405386,0.818718450173537,1.57306439111559,1.22433556948361,0.962787081228281,0.639337125799041,3.29851300186716,1.59570926097305,0.426224750532694,1.16083695451434,3.40431134814684,0.622822248995575,2.00998932205395,2.08593167368081,2.17188844705117,2.42159801053347,1.47311054395026,2.21523671208619,0.211255286311942,1.27562579979026,0.209658645508376,0.112328631146495,0.150176892841506,0.48217676009124,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0.651844533267181,0,0,0.222820913770347,0,0.443067789167242,0,0.25618263945135,0.390178042679635,0,0.276350017785848,0.289803085735052,0,0,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0.639933055772092,1.24930726552346,0.710331756132051,0,0.80642697289893,2.67440195783507,0.868946423296794,0,1.34140171940727,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.261958150995425,0.364295288292542,1.11235332835329,0.649094787309367,0.174129737299267,1.19662164466979,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0.436094052142534,0,0.379891534993739,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0.818238361772504,0,0.365921118388786,0.132529768321485,0.116193942869518,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.110293972732394,0,0,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0.100528972411631,0.370353780634118,0.651616610620649,0,0,0.231860809950154,0,0,0,0,0,0,0,1.40402559083543,0.297262324577456,0,0,0.425325291727159,0,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0.600686115687835,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,4.21667878966063,0,1.14861935834114,0,0,0.205476322550383,0,0.224170287987055,0.394061520403854,1.07813787429759,0.256686072559497,0,0,0,0.167516265334349,0,18.7251755986796,14.9580729602012,4.55857064779639,0.12269149171914,0,0,1.45579603071565,3.21172179834891,0.630809660135739,0.468565659970853,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0.802025881213139,0.368323955743585,0.114814448164607,0.364182336013434,0.393373244878272,0,0,1.56869953835371,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.658589785919804,0,0.349934720244983,0.288666338176536,0,2.17781969722645,0.0941438007767792,0.43050537267123,3.36942951335251,0,0.229723400206959,0,0.764637207142375,2.27858874869665,0.714695326373367,0.822724546172388,1.29694662238543,0.540031437238115,3.17250070517708,0,0,0,0,0,0.0711418433484141,0,0.399158742865633,0,0,0,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0,0.556543525114529,0.329607748453519,0,0.996239941255349,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0.591860433821602,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.508507300585533,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.179515288819544,0,0.957003479195758,0.274792780205587,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,1.68798451622422,1.63232808159148,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0.104421949505455,0.067401132980677,0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| ||
|short_description=p@chr16:11643374..11643388,- | |short_description=p@chr16:11643374..11643388,- | ||
}} | }} |
Latest revision as of 06:11, 25 July 2015
Short description: | p@chr16:11643374..11643388, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:11643374..11643388, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.52e-38 | 48 |
phagocyte | 4.52e-38 | 48 |
myeloid leukocyte | 2.00e-37 | 72 |
classical monocyte | 4.48e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.48e-37 | 42 |
monopoietic cell | 1.29e-31 | 59 |
monocyte | 1.29e-31 | 59 |
monoblast | 1.29e-31 | 59 |
promonocyte | 1.29e-31 | 59 |
macrophage dendritic cell progenitor | 2.26e-30 | 61 |
myeloid lineage restricted progenitor cell | 1.37e-27 | 66 |
granulocyte monocyte progenitor cell | 4.40e-27 | 67 |
myeloid cell | 2.27e-22 | 108 |
common myeloid progenitor | 2.27e-22 | 108 |
leukocyte | 3.00e-20 | 136 |
nongranular leukocyte | 4.76e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 4.84e-16 | 120 |
hematopoietic oligopotent progenitor cell | 8.35e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.35e-16 | 161 |
hematopoietic stem cell | 8.42e-15 | 168 |
hematopoietic cell | 1.16e-14 | 177 |
neutrophil | 4.47e-12 | 3 |
granulocyte | 2.55e-11 | 8 |
blood cell | 4.15e-11 | 11 |
eosinophil | 5.40e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.76e-23 | 98 |
blood island | 2.76e-23 | 98 |
bone marrow | 4.07e-23 | 76 |
hemolymphoid system | 4.03e-22 | 108 |
bone element | 5.91e-21 | 82 |
immune system | 2.19e-19 | 93 |
skeletal element | 1.60e-18 | 90 |
skeletal system | 4.97e-16 | 100 |
lateral plate mesoderm | 7.72e-10 | 203 |
musculoskeletal system | 1.06e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.73e-08 | 2 |