FFCP PHASE1:Hg19::chr16:15797790..15797816,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-450bp_to_AK130790_5end | |association_with_transcript=-450bp_to_AK130790_5end | ||
|cluster_id=chr16:15797790..15797816,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_AK130790_5end | |description=CAGE_peak_1_at_AK130790_5end | ||
|id=chr16:15797790..15797816,+ | |id=chr16:15797790..15797816,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.11e-12;1!UBERON:0000358;1.48e-12;1!UBERON:0009143;2.60e-12;1!UBERON:0005754;2.60e-12;1!UBERON:0006242;4.07e-12;1!UBERON:0006965;5.73e-07;2!UBERON:0007297;8.77e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-27!115;UBERON:0006947!1.66e-11!3;UBERON:0004054!1.66e-11!3;UBERON:0005904!1.00e-08!4;UBERON:0000059!3.99e-08!11;UBERON:0005409!5.32e-08!35;UBERON:0003135!5.81e-08!11;UBERON:0002950!9.88e-08!2;UBERON:0001891!9.88e-08!2;UBERON:0009616!9.88e-08!2;UBERON:0002360!2.45e-07!2;UBERON:0000094!2.45e-07!2;UBERON:0007645!2.45e-07!2;UBERON:0000160!5.50e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!1.26e-27!115;UBERON:0006947!1.66e-11!3;UBERON:0004054!1.66e-11!3;UBERON:0005904!1.00e-08!4;UBERON:0000059!3.99e-08!11;UBERON:0005409!5.32e-08!35;UBERON:0003135!5.81e-08!11;UBERON:0002950!9.88e-08!2;UBERON:0001891!9.88e-08!2;UBERON:0009616!9.88e-08!2;UBERON:0002360!2.45e-07!2;UBERON:0000094!2.45e-07!2;UBERON:0007645!2.45e-07!2;UBERON:0000160!5.50e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.94e-17;22!UBERON:0006947;1.42e-15;3!UBERON:0004054;1.42e-15;3!UBERON:0000160;2.43e-15;17!UBERON:0004921;2.41e-14;33!UBERON:0000989;1.11e-12;1!UBERON:0008811;1.11e-12;1!UBERON:0002146;1.86e-12;1!UBERON:0005623;1.86e-12;1!UBERON:0001000;2.60e-12;1!UBERON:0000998;2.60e-12;1!UBERON:0006868;2.60e-12;1!UBERON:0005352;2.60e-12;1!UBERON:0005795;4.07e-12;1!UBERON:0005904;6.37e-12;4!UBERON:0000059;7.51e-10;11!UBERON:0003135;1.19e-09;11!UBERON:0002108;1.44e-09;4!UBERON:0000922;9.83e-09;49!UBERON:0001255;7.40e-07;2!UBERON:0001556;7.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.53e-15,3;UBERON:0004054,1.53e-15,3;UBERON:0000160,2.32e-15,17;UBERON:0005409,5.70e-15,25;UBERON:0000989,1.11e-12,1;UBERON:0008811,1.11e-12,1;UBERON:0006258,1.11e-12,1;UBERON:0005876,1.11e-12,1;UBERON:0004874,1.11e-12,1;UBERON:0002146,1.75e-12,1;UBERON:0005623,1.75e-12,1;UBERON:0001000,2.46e-12,1;UBERON:0005352,2.46e-12,1;UBERON:0000998,3.08e-12,1;UBERON:0006868,3.08e-12,1;UBERON:0005904,6.73e-12,4;UBERON:0000059,7.18e-10,11;UBERON:0003135,1.23e-09,11;UBERON:0002108,1.44e-09,4;UBERON:0007023,2.07e-08,114;UBERON:0001255,7.61e-07,2;UBERON:0001556,7.61e-07,2 | |||
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| ||
|short_description=p1@AK130790 | |short_description=p1@AK130790 | ||
}} | }} |
Latest revision as of 06:32, 25 July 2015
Short description: | p1@AK130790 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK130790_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -450bp_to_AK130790_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.53e-15 | 3 |
internal male genitalia | 1.53e-15 | 3 |
intestine | 2.32e-15 | 17 |
gastrointestinal system | 5.70e-15 | 25 |
penis | 1.11e-12 | 1 |
intromittent organ | 1.11e-12 | 1 |
lateral plate mesenchyme | 1.11e-12 | 1 |
undifferentiated genital tubercle | 1.11e-12 | 1 |
somatopleure | 1.11e-12 | 1 |
pulmonary valve | 1.75e-12 | 1 |
semi-lunar valve | 1.75e-12 | 1 |
vas deferens | 2.46e-12 | 1 |
spermatic cord | 2.46e-12 | 1 |
seminal vesicle | 3.08e-12 | 1 |
seminal fluid secreting gland | 3.08e-12 | 1 |
duct of male reproductive system | 6.73e-12 | 4 |
large intestine | 7.18e-10 | 11 |
male reproductive organ | 1.23e-09 | 11 |
small intestine | 1.44e-09 | 4 |
adult organism | 2.07e-08 | 114 |
urinary bladder | 7.61e-07 | 2 |
lower urinary tract | 7.61e-07 | 2 |