FFCP PHASE1:Hg19::chr16:15833939..15833958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:15833939..15833958,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr16:15833939..15833958,+ | |description=CAGE_peak_at_chr16:15833939..15833958,+ | ||
|id=chr16:15833939..15833958,+ | |id=chr16:15833939..15833958,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.46e-16;2!UBERON:0004874;2.22e-09;1!UBERON:0006603;2.44e-09;65!UBERON:0000358;2.50e-09;1!UBERON:0009143;3.58e-09;1!UBERON:0006242;4.19e-09;1!UBERON:0005754;6.46e-09;1 | |||
|ontology_enrichment_disease=DOID:114!5.48e-07!2 | |ontology_enrichment_disease=DOID:114!5.48e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.02e-53!115;UBERON:0006947!1.74e-10!3;UBERON:0004054!1.74e-10!3;UBERON:0003135!4.16e-10!11;UBERON:0005409!1.51e-08!35;UBERON:0005904!5.91e-08!4;UBERON:0000059!2.21e-07!11;UBERON:0003127!3.90e-07!2;UBERON:0004921!4.35e-07!129;UBERON:0004185!4.35e-07!129;UBERON:0002950!5.65e-07!2;UBERON:0001891!5.65e-07!2;UBERON:0009616!5.65e-07!2;UBERON:0000062!6.79e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.49e-23;3!UBERON:0004054;4.49e-23;3!UBERON:0005904;1.81e-17;4!UBERON:0003135;4.37e-17;11!UBERON:0000160;3.56e-15;17!UBERON:0002108;2.06e-14;4!UBERON:0004175;1.87e-12;21!UBERON:0003101;5.58e-12;22!UBERON:0000079;5.58e-12;22!UBERON:0005409;9.00e-12;22!UBERON:0004921;6.87e-10;33!UBERON:0000989;2.22e-09;1!UBERON:0008811;2.22e-09;1!UBERON:0005795;6.46e-09;1!UBERON:0006834;6.46e-09;1!UBERON:0001000;6.46e-09;1!UBERON:0000998;6.46e-09;1!UBERON:0000996;6.46e-09;1!UBERON:0006868;6.46e-09;1!UBERON:0005352;6.46e-09;1!UBERON:0001301;1.03e-08;1!UBERON:0003133;1.34e-08;44!UBERON:0000058;2.65e-07;10!UBERON:0000059;4.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.38e-23,3;UBERON:0004054,7.38e-23,3;UBERON:0007023,1.98e-18,114;UBERON:0005904,2.62e-17,4;UBERON:0003135,5.56e-17,11;UBERON:0000160,3.47e-15,17;UBERON:0002108,2.01e-14,4;UBERON:0003101,6.29e-12,22;UBERON:0000079,6.29e-12,22;UBERON:0003133,2.31e-11,48;UBERON:0005156,3.49e-11,59;UBERON:0000990,3.49e-11,59;UBERON:0004175,2.30e-10,25;UBERON:0005409,2.31e-10,25;UBERON:0003064,2.16e-09,28;UBERON:0000989,2.22e-09,1;UBERON:0008811,2.22e-09,1;UBERON:0006258,2.22e-09,1;UBERON:0005876,2.22e-09,1;UBERON:0004874,2.22e-09,1;UBERON:0006834,5.31e-09,1;UBERON:0000996,5.75e-09,1;UBERON:0001000,7.27e-09,1;UBERON:0005352,7.27e-09,1;UBERON:0000998,8.49e-09,1;UBERON:0006868,8.49e-09,1;UBERON:0001301,1.16e-08,1;UBERON:0000059,4.60e-07,11;UBERON:0001046,9.09e-07,19;UBERON:0004876,9.37e-07,11 | |||
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| ||
|short_description=p@chr16:15833939..15833958,+ | |short_description=p@chr16:15833939..15833958,+ | ||
}} | }} |
Latest revision as of 06:36, 25 July 2015
Short description: | p@chr16:15833939..15833958, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15833939..15833958, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.38e-23 | 3 |
internal male genitalia | 7.38e-23 | 3 |
adult organism | 1.98e-18 | 114 |
duct of male reproductive system | 2.62e-17 | 4 |
male reproductive organ | 5.56e-17 | 11 |
intestine | 3.47e-15 | 17 |
small intestine | 2.01e-14 | 4 |
male organism | 6.29e-12 | 22 |
male reproductive system | 6.29e-12 | 22 |
reproductive organ | 2.31e-11 | 48 |
reproductive structure | 3.49e-11 | 59 |
reproductive system | 3.49e-11 | 59 |
internal genitalia | 2.30e-10 | 25 |
gastrointestinal system | 2.31e-10 | 25 |
intermediate mesoderm | 2.16e-09 | 28 |
penis | 2.22e-09 | 1 |
intromittent organ | 2.22e-09 | 1 |
lateral plate mesenchyme | 2.22e-09 | 1 |
undifferentiated genital tubercle | 2.22e-09 | 1 |
somatopleure | 2.22e-09 | 1 |
uterus or analog | 5.31e-09 | 1 |
vagina | 5.75e-09 | 1 |
vas deferens | 7.27e-09 | 1 |
spermatic cord | 7.27e-09 | 1 |
seminal vesicle | 8.49e-09 | 1 |
seminal fluid secreting gland | 8.49e-09 | 1 |
epididymis | 1.16e-08 | 1 |
large intestine | 4.60e-07 | 11 |
hindgut | 9.09e-07 | 19 |
urogenital ridge | 9.37e-07 | 11 |