FFCP PHASE1:Hg19::chr16:50581615..50581631,+: Difference between revisions
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|id=chr16:50581615..50581631,+
|short_description=p@chr16:50581615..50581631,+
|description=CAGE_peak_at_chr16:50581615..50581631,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:50581615..50581631,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr16:50581615..50581631,+ | |||
|id=chr16:50581615..50581631,+ | |||
|ontology_enrichment_celltype=CL:0000623!4.71e-13!3;CL:0000825!4.71e-13!3;CL:0000842!2.28e-12!3;CL:0000224!2.14e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.03e-29;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-29,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.32e-32;11!UBERON:0009497;1.78e-27;13!UBERON:0001041;1.28e-18;30!UBERON:0003104;1.08e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.67e-23;1!DOID:1357;1.67e-23;1!DOID:7;6.91e-09;39!DOID:5409;6.50e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.67e-23,1;DOID:1357,1.67e-23,1;DOID:7,1.86e-09,39;DOID:305,1.69e-07,106;DOID:5409,6.50e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.67e-23;1!UBERON:0001825;1.67e-23;1!UBERON:0002107;5.67e-19;19!UBERON:0006925;5.67e-19;19!UBERON:0002423;1.56e-14;25!UBERON:0002365;3.33e-11;31!UBERON:0002330;3.33e-11;31!UBERON:0002368;3.21e-10;33!UBERON:0000949;7.59e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.67e-23,1;UBERON:0001825,1.67e-23,1;UBERON:0002107,5.81e-19,19;UBERON:0006925,5.81e-19,19;UBERON:0008836,5.81e-19,19;UBERON:0008835,1.92e-16,22;UBERON:0003894,1.92e-16,22;UBERON:0009854,9.48e-16,23;UBERON:0007499,1.58e-14,25;UBERON:0009497,1.58e-14,25;UBERON:0000015,1.58e-14,25;UBERON:0002423,1.58e-14,25;UBERON:0006235,1.58e-14,25;UBERON:0004161,1.58e-14,25;UBERON:0009856,5.51e-14,26;UBERON:0002365,8.48e-12,31;UBERON:0002330,8.48e-12,31;UBERON:0002368,1.70e-10,35;UBERON:0000949,3.05e-08,45;UBERON:0003929,6.41e-07,54;UBERON:0005172,6.41e-07,54;UBERON:0005173,6.41e-07,54;UBERON:0005911,6.59e-07,82 | |||
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| ||
|short_description=p@chr16:50581615..50581631,+ | |||
}} | }} |
Latest revision as of 09:30, 25 July 2015
Short description: | p@chr16:50581615..50581631, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50581615..50581631, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-29 | 12 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.67e-23 | 1 |
paranasal sinus | 1.67e-23 | 1 |
liver | 5.81e-19 | 19 |
digestive gland | 5.81e-19 | 19 |
liver bud | 5.81e-19 | 19 |
hepatic diverticulum | 1.92e-16 | 22 |
liver primordium | 1.92e-16 | 22 |
digestive tract diverticulum | 9.48e-16 | 23 |
epithelial sac | 1.58e-14 | 25 |
epithelium of foregut-midgut junction | 1.58e-14 | 25 |
anatomical boundary | 1.58e-14 | 25 |
hepatobiliary system | 1.58e-14 | 25 |
foregut-midgut junction | 1.58e-14 | 25 |
septum transversum | 1.58e-14 | 25 |
sac | 5.51e-14 | 26 |
exocrine gland | 8.48e-12 | 31 |
exocrine system | 8.48e-12 | 31 |
endocrine gland | 1.70e-10 | 35 |
endocrine system | 3.05e-08 | 45 |
gut epithelium | 6.41e-07 | 54 |
abdomen element | 6.41e-07 | 54 |
abdominal segment element | 6.41e-07 | 54 |
endo-epithelium | 6.59e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.67e-23 | 1 |
maxillary sinus cancer | 1.67e-23 | 1 |
disease of anatomical entity | 1.86e-09 | 39 |
carcinoma | 1.69e-07 | 106 |
lung small cell carcinoma | 6.50e-07 | 4 |