FFCP PHASE1:Hg19::chr16:85832146..85832165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85832146..85832165,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_at_chr16:85832146..85832165,+ | |description=CAGE_peak_at_chr16:85832146..85832165,+ | ||
|id=chr16:85832146..85832165,+ | |id=chr16:85832146..85832165,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.93e-16!4;CL:0000223!2.16e-12!59;CL:0000181!2.45e-12!12;CL:0000417!2.45e-12!12;CL:0000668!2.45e-12!12;CL:0000414!2.45e-12!12;CL:0000412!2.45e-12!12;CL:0000182!2.45e-12!12;CL:0002253!4.02e-09!2;CL:0002535!5.49e-09!2 | |ontology_enrichment_celltype=CL:0002563!1.93e-16!4;CL:0000223!2.16e-12!59;CL:0000181!2.45e-12!12;CL:0000417!2.45e-12!12;CL:0000668!2.45e-12!12;CL:0000414!2.45e-12!12;CL:0000412!2.45e-12!12;CL:0000182!2.45e-12!12;CL:0002253!4.02e-09!2;CL:0002535!5.49e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002563;4.53e-29;4!CL:0000182;4.75e-22;12!CL:0002253;1.54e-15;2!CL:0002535;2.55e-15;2!CL:0002231;9.90e-11;3!CL:0002076;4.09e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.21e-29,4;CL:0000182,4.75e-22,12;CL:0000223,7.88e-18,58;CL:0002253,1.54e-15,2;CL:0002535,2.74e-15,2;CL:0002231,9.90e-11,3;CL:0002076,9.61e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.65e-24;11!UBERON:0009497;2.03e-20;13!UBERON:0003104;4.79e-15;31!CL:0000223;3.02e-11;58!UBERON:0001041;2.84e-09;30 | |||
|ontology_enrichment_disease=DOID:3493!6.42e-09!2;DOID:305!1.27e-08!106 | |ontology_enrichment_disease=DOID:3493!6.42e-09!2;DOID:305!1.27e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:7;1.24e-07;39!DOID:4362;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.79e-07,39;DOID:305,5.27e-07,106;DOID:4362,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.93e-16!4;UBERON:0001262!1.93e-16!4;UBERON:0004786!1.93e-16!4;UBERON:0004808!1.93e-16!4;UBERON:0001277!1.93e-16!4;UBERON:0003350!2.37e-13!5;UBERON:0003929!4.00e-10!54;UBERON:0006955!5.49e-09!2;UBERON:0004801!5.49e-09!2;UBERON:0002107!5.35e-08!19;UBERON:0006925!5.35e-08!19;UBERON:0008836!5.35e-08!19;UBERON:0000485!8.03e-08!9;UBERON:0000995!4.14e-07!21;UBERON:0008835!5.62e-07!22;UBERON:0003894!5.62e-07!22;UBERON:0005795!8.27e-07!22;UBERON:0003975!8.27e-07!22 | |ontology_enrichment_uberon=UBERON:0001242!1.93e-16!4;UBERON:0001262!1.93e-16!4;UBERON:0004786!1.93e-16!4;UBERON:0004808!1.93e-16!4;UBERON:0001277!1.93e-16!4;UBERON:0003350!2.37e-13!5;UBERON:0003929!4.00e-10!54;UBERON:0006955!5.49e-09!2;UBERON:0004801!5.49e-09!2;UBERON:0002107!5.35e-08!19;UBERON:0006925!5.35e-08!19;UBERON:0008836!5.35e-08!19;UBERON:0000485!8.03e-08!9;UBERON:0000995!4.14e-07!21;UBERON:0008835!5.62e-07!22;UBERON:0003894!5.62e-07!22;UBERON:0005795!8.27e-07!22;UBERON:0003975!8.27e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.53e-29;4!UBERON:0001262;4.53e-29;4!UBERON:0004786;4.53e-29;4!UBERON:0004808;4.53e-29;4!UBERON:0001277;4.53e-29;4!UBERON:0000485;4.19e-17;7!UBERON:0003929;4.19e-17;7!UBERON:0006955;2.55e-15;2!UBERON:0004801;2.55e-15;2!UBERON:0003350;4.22e-15;8!UBERON:0002107;3.16e-14;19!UBERON:0006925;3.16e-14;19!UBERON:0002423;5.46e-11;25!UBERON:0001052;1.96e-08;4!UBERON:0002365;2.32e-08;31!UBERON:0002330;2.32e-08;31!UBERON:0002368;6.55e-08;33!UBERON:0000160;3.00e-07;17!UBERON:0004907;5.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.21e-29,4;UBERON:0001262,4.21e-29,4;UBERON:0004786,4.21e-29,4;UBERON:0004808,4.21e-29,4;UBERON:0001277,4.21e-29,4;UBERON:0003929,3.99e-19,54;UBERON:0006955,2.74e-15,2;UBERON:0004801,2.74e-15,2;UBERON:0003350,4.07e-15,8;UBERON:0002107,3.16e-14,19;UBERON:0006925,3.16e-14,19;UBERON:0008836,3.16e-14,19;UBERON:0000485,1.49e-13,9;UBERON:0005911,1.07e-12,82;UBERON:0008835,2.17e-12,22;UBERON:0003894,2.17e-12,22;UBERON:0009854,6.98e-12,23;UBERON:0007499,5.46e-11,25;UBERON:0009497,5.46e-11,25;UBERON:0000015,5.46e-11,25;UBERON:0002423,5.46e-11,25;UBERON:0006235,5.46e-11,25;UBERON:0004161,5.46e-11,25;UBERON:0009856,1.36e-10,26;UBERON:0002365,5.39e-09,31;UBERON:0002330,5.39e-09,31;UBERON:0004921,8.24e-09,118;UBERON:0001052,1.96e-08,4;UBERON:0002530,3.36e-08,59;UBERON:0002368,4.84e-08,35;UBERON:0000160,2.95e-07,17;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145;UBERON:0000490,4.16e-07,148;UBERON:0004907,5.38e-07,5;UBERON:0001046,6.19e-07,19 | |||
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|short_description=p@chr16:85832146..85832165,+ | |short_description=p@chr16:85832146..85832165,+ | ||
}} | }} |
Latest revision as of 13:02, 25 July 2015
Short description: | p@chr16:85832146..85832165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85832146..85832165, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.21e-29 | 4 |
hepatocyte | 4.75e-22 | 12 |
endodermal cell | 7.88e-18 | 58 |
epithelial cell of large intestine | 1.54e-15 | 2 |
epithelial cell of cervix | 2.74e-15 | 2 |
epithelial cell of prostate | 9.90e-11 | 3 |
endo-epithelial cell | 9.61e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.79e-07 | 39 |
carcinoma | 5.27e-07 | 106 |
cervical cancer | 6.77e-07 | 5 |