FFCP PHASE1:Hg19::chr17:27504880..27504890,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27504880..27504890,- | |||
|description=CAGE_peak_at_chr17:27504880..27504890,- | |description=CAGE_peak_at_chr17:27504880..27504890,- | ||
|id=chr17:27504880..27504890,- | |id=chr17:27504880..27504890,- | ||
|ontology_enrichment_celltype=CL:0002202;1.17e-22;9!CL:0002632;1.17e-22;9!CL:0002368;6.32e-16;13!CL:0002328;8.96e-09;3!CL:0000322;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0000182;2.85e-08;12 | |ontology_enrichment_celltype=CL:0002202!3.99e-09!9;CL:0002632!3.99e-09!9;CL:1000415!8.51e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002202;1.17e-22;9!CL:0002632;1.17e-22;9!CL:0002368;6.32e-16;13!CL:0002328;8.96e-09;3!CL:0000322;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0000182;2.85e-08;12 | ||
|ontology_enrichment_disease=DOID:3493;1.65e-12;2!DOID:3910;2.74e-12;2 | |ontology_enrichment_celltype_v019_2=CL:0002202,1.17e-22,9;CL:0002632,1.17e-22,9;CL:0002368,6.32e-16,13;CL:0000223,1.17e-09,58;CL:0002328,8.31e-09,3;CL:0000068,1.12e-08,3;CL:0000069,1.12e-08,3;CL:0000307,1.12e-08,3;CL:0000377,1.12e-08,3;CL:0000322,1.51e-08,3;CL:0000182,2.85e-08,12 | ||
|ontology_enrichment_uberon=UBERON:0002423;1.73e-14;25!UBERON:0007196;6.72e-14;15!UBERON:0001558;6.72e-14;15!UBERON:0002294;1.27e-13;7!UBERON:0001173;1.27e-13;7!UBERON:0004903;2.74e-12;2!UBERON:0002173;2.74e-12;2!UBERON:0002186;2.74e-12;2!UBERON:0000058;7.91e-10;10!UBERON:0004815;8.96e-09;3!UBERON:0002031;8.96e-09;3!UBERON:0002110;1.26e-08;3!UBERON:0004821;1.26e-08;3!UBERON:0007499;1.26e-08;3!UBERON:0003215;1.26e-08;3!UBERON:0010368;1.26e-08;3!UBERON:0009911;1.26e-08;3!UBERON:0002299;1.26e-08;3!UBERON:0006524;1.26e-08;3!UBERON:0008874;1.26e-08;3!UBERON:0002169;1.26e-08;3!UBERON:0004894;1.26e-08;3!UBERON:0002394;6.87e-07;4!UBERON:0003928;6.87e-07;4!UBERON:0009856;8.85e-07;4 | |ontology_enrichment_development_v019=UBERON:0006242;3.67e-23;1!UBERON:0009497;6.32e-16;13!UBERON:0004161;6.10e-09;11!CL:0000377;1.26e-08;3!UBERON:0001041;2.90e-07;30 | ||
|ontology_enrichment_disease=DOID:3493!6.65e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.65e-12;2!DOID:3910;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.85e-12,2;DOID:3910,3.62e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.62e-13!129;UBERON:0004185!3.62e-13!129;UBERON:0001007!1.05e-12!155;UBERON:0001555!1.05e-12!155;UBERON:0007026!1.05e-12!155;UBERON:0002294!2.94e-11!7;UBERON:0001173!2.94e-11!7;UBERON:0004912!2.94e-11!7;UBERON:0004119!5.14e-11!169;UBERON:0000925!5.14e-11!169;UBERON:0006595!5.14e-11!169;UBERON:0000077!6.87e-11!130;UBERON:0001041!3.40e-10!98;UBERON:0002110!4.96e-10!3;UBERON:0006242!4.96e-10!3;UBERON:0001896!1.14e-09!3;UBERON:0005290!1.14e-09!3;UBERON:0010096!1.14e-09!3;UBERON:0009497!6.61e-09!25;UBERON:0000015!6.61e-09!25;UBERON:0002423!6.61e-09!25;UBERON:0006235!6.61e-09!25;UBERON:0004161!6.61e-09!25;UBERON:0007196!8.63e-08!14;UBERON:0001558!8.63e-08!14;UBERON:0000072!2.24e-07!46;UBERON:0005911!2.70e-07!82;UBERON:0000063!5.21e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.73e-14;25!UBERON:0007196;6.72e-14;15!UBERON:0001558;6.72e-14;15!UBERON:0002294;1.27e-13;7!UBERON:0001173;1.27e-13;7!UBERON:0004903;2.74e-12;2!UBERON:0002173;2.74e-12;2!UBERON:0002186;2.74e-12;2!UBERON:0000058;7.91e-10;10!UBERON:0004815;8.96e-09;3!UBERON:0002031;8.96e-09;3!UBERON:0002110;1.26e-08;3!UBERON:0004821;1.26e-08;3!UBERON:0007499;1.26e-08;3!UBERON:0003215;1.26e-08;3!UBERON:0010368;1.26e-08;3!UBERON:0009911;1.26e-08;3!UBERON:0002299;1.26e-08;3!UBERON:0006524;1.26e-08;3!UBERON:0008874;1.26e-08;3!UBERON:0002169;1.26e-08;3!UBERON:0004894;1.26e-08;3!UBERON:0002394;6.87e-07;4!UBERON:0003928;6.87e-07;4!UBERON:0009856;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.58e-14,25;UBERON:0000015,1.58e-14,25;UBERON:0002423,1.58e-14,25;UBERON:0006235,1.58e-14,25;UBERON:0004161,1.58e-14,25;UBERON:0007499,1.89e-14,25;UBERON:0009856,6.52e-14,26;UBERON:0007196,6.73e-14,15;UBERON:0001558,6.73e-14,15;UBERON:0004903,3.62e-12,2;UBERON:0002173,3.62e-12,2;UBERON:0002186,3.62e-12,2;UBERON:0002294,7.22e-11,9;UBERON:0001173,7.22e-11,9;UBERON:0004912,7.22e-11,9;UBERON:0005911,1.09e-09,82;UBERON:0008835,1.09e-09,22;UBERON:0003894,1.09e-09,22;UBERON:0009854,2.70e-09,23;UBERON:0001041,4.02e-09,87;UBERON:0004815,8.31e-09,3;UBERON:0002031,8.31e-09,3;UBERON:0002110,1.04e-08,3;UBERON:0006242,1.04e-08,3;UBERON:0004821,1.51e-08,3;UBERON:0003215,1.51e-08,3;UBERON:0010368,1.51e-08,3;UBERON:0009911,1.51e-08,3;UBERON:0002299,1.51e-08,3;UBERON:0006524,1.51e-08,3;UBERON:0008874,1.51e-08,3;UBERON:0002169,1.51e-08,3;UBERON:0004894,1.51e-08,3;UBERON:0005177,7.77e-08,101;UBERON:0001007,2.99e-07,145;UBERON:0001555,2.99e-07,145;UBERON:0007026,2.99e-07,145;UBERON:0009569,4.68e-07,112;UBERON:0003929,6.41e-07,54 | |||
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| ||
|short_description=p@chr17:27504880..27504890,- | |short_description=p@chr17:27504880..27504890,- | ||
}} | }} |
Latest revision as of 15:08, 25 July 2015
Short description: | p@chr17:27504880..27504890, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27504880..27504890, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.17e-22 | 9 |
epithelial cell of lower respiratory tract | 1.17e-22 | 9 |
respiratory epithelial cell | 6.32e-16 | 13 |
endodermal cell | 1.17e-09 | 58 |
bronchial epithelial cell | 8.31e-09 | 3 |
duct epithelial cell | 1.12e-08 | 3 |
branched duct epithelial cell | 1.12e-08 | 3 |
tracheal epithelial cell | 1.12e-08 | 3 |
tracheoblast | 1.12e-08 | 3 |
pneumocyte | 1.51e-08 | 3 |
hepatocyte | 2.85e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.85e-12 | 2 |
lung adenocarcinoma | 3.62e-12 | 2 |