FFCP PHASE1:Hg19::chr17:38643498..38643544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38643498..38643544,+ | |||
|coexpression_cluster_id=C918 | |||
|description=CAGE_peak_at_chr17:38643498..38643544,+ | |description=CAGE_peak_at_chr17:38643498..38643544,+ | ||
|id=chr17:38643498..38643544,+ | |id=chr17:38643498..38643544,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.30e-30!254;CL:0002076!4.89e-23!43;CL:0000223!8.78e-20!59;CL:0002251!1.37e-15!21;CL:0002159!4.65e-11!13;CL:0000622!8.87e-10!5;CL:0002368!9.35e-10!13;CL:0000244!2.02e-08!4;CL:0000731!2.02e-08!4;CL:0000154!4.80e-08!6;CL:0000349!5.61e-07!3;CL:0002577!5.61e-07!3 | |ontology_enrichment_celltype=CL:0000066!2.30e-30!254;CL:0002076!4.89e-23!43;CL:0000223!8.78e-20!59;CL:0002251!1.37e-15!21;CL:0002159!4.65e-11!13;CL:0000622!8.87e-10!5;CL:0002368!9.35e-10!13;CL:0000244!2.02e-08!4;CL:0000731!2.02e-08!4;CL:0000154!4.80e-08!6;CL:0000349!5.61e-07!3;CL:0002577!5.61e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.19e-16;14!CL:0002076;2.31e-16;42!CL:0000349;3.65e-14;19!CL:0002251;1.23e-12;20!CL:0000244;1.24e-12;4!CL:0000731;1.24e-12;4!CL:0002577;2.58e-10;3!CL:0000622;3.56e-10;5!CL:0002621;2.80e-09;3!CL:0002541;5.04e-09;3!CL:0000240;1.01e-08;6!CL:0000311;1.01e-08;6!CL:0000079;1.01e-08;6!CL:0000237;1.01e-08;6!CL:0000362;1.42e-08;9!CL:0000154;1.79e-08;6!CL:0002327;8.87e-08;4!CL:0002368;1.28e-07;13!CL:0002536;1.50e-07;2!CL:0002077;1.77e-07;34!CL:0000575;1.95e-07;2!CL:0000317;3.19e-07;2!CL:1000448;3.19e-07;2!CL:0002308;3.19e-07;2!CL:0002140;3.19e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.64e-27,253;CL:0002076,2.28e-18,42;CL:0002159,2.29e-16,14;CL:0000349,3.28e-14,19;CL:0002251,1.09e-12,20;CL:0000244,1.23e-12,4;CL:0000731,1.23e-12,4;CL:0000223,4.91e-12,58;CL:0002577,2.58e-10,3;CL:0000622,2.98e-10,5;CL:0002621,2.16e-09,3;CL:0002541,4.57e-09,3;CL:0000240,9.88e-09,6;CL:0000311,9.88e-09,6;CL:0000079,9.88e-09,6;CL:0000237,9.88e-09,6;CL:0000036,9.88e-09,6;CL:0000357,9.88e-09,6;CL:0000114,9.88e-09,6;CL:0000362,1.32e-08,9;CL:0002077,1.53e-08,34;CL:0000154,1.55e-08,6;CL:0000076,5.73e-08,63;CL:0002327,9.93e-08,4;CL:0002368,1.15e-07,13;CL:0002536,1.47e-07,2;CL:0000575,1.83e-07,2;CL:0000317,2.66e-07,2;CL:1000448,2.66e-07,2;CL:0002308,2.66e-07,2;CL:0002140,2.66e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;1.01e-08;6!CL:0000114;1.01e-08;6!CL:0000223;4.64e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.59e-15!106;DOID:1749!4.50e-10!14;DOID:0050687!9.62e-09!143 | |ontology_enrichment_disease=DOID:305!1.59e-15!106;DOID:1749!4.50e-10!14;DOID:0050687!9.62e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.61e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.80e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.58e-31!169;UBERON:0000925!6.58e-31!169;UBERON:0006595!6.58e-31!169;UBERON:0001004!7.51e-26!72;UBERON:0000161!7.57e-22!35;UBERON:0000077!2.14e-20!130;UBERON:0001007!5.05e-20!155;UBERON:0001555!5.05e-20!155;UBERON:0007026!5.05e-20!155;UBERON:0000166!1.30e-17!21;UBERON:0000065!3.74e-16!53;UBERON:0004921!7.08e-16!129;UBERON:0004185!7.08e-16!129;UBERON:0001737!1.99e-15!9;UBERON:0005631!6.41e-15!14;UBERON:0000158!6.41e-15!14;UBERON:0001041!8.68e-15!98;UBERON:0001557!8.90e-15!19;UBERON:0000165!4.84e-14!28;UBERON:0000930!4.84e-14!28;UBERON:0000072!3.88e-13!46;UBERON:0003124!8.04e-13!7;UBERON:0003102!4.22e-12!95;UBERON:0001044!1.78e-10!6;UBERON:0003293!1.78e-10!6;UBERON:0003294!1.78e-10!6;UBERON:0010047!1.78e-10!6;UBERON:0000167!1.78e-10!6;UBERON:0008947!4.61e-10!38;UBERON:0003258!4.61e-10!38;UBERON:0000365!1.88e-09!5;UBERON:0002530!2.95e-09!59;UBERON:0003729!5.47e-09!5;UBERON:0001444!1.57e-08!48;UBERON:0000062!2.06e-08!511;UBERON:0001987!2.86e-08!4;UBERON:0004340!2.86e-08!4;UBERON:0005911!2.97e-08!82;UBERON:0002365!4.85e-08!31;UBERON:0002330!4.85e-08!31;UBERON:0000344!5.24e-08!12;UBERON:0005910!8.86e-08!6;UBERON:0003408!1.20e-07!10;UBERON:0000078!1.32e-07!18;UBERON:0000478!1.67e-07!24;UBERON:0003343!3.31e-07!4;UBERON:0004785!3.31e-07!4;UBERON:0000064!5.75e-07!219;UBERON:0000467!6.79e-07!625;UBERON:0000480!7.64e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.01e-19;9!UBERON:0001557;3.01e-19;9!UBERON:0005631;6.85e-14;10!UBERON:0000158;6.85e-14;10!UBERON:0000161;5.97e-13;19!UBERON:0000166;5.97e-13;19!UBERON:0000165;4.70e-12;28!UBERON:0000486;2.55e-11;12!UBERON:0000478;9.17e-11;24!UBERON:0001004;3.78e-10;65!UBERON:0000365;4.20e-10;5!UBERON:0003729;7.97e-10;13!UBERON:0001949;2.80e-09;3!UBERON:0000065;3.89e-09;44!UBERON:0003124;5.04e-09;3!UBERON:0000920;5.04e-09;3!UBERON:0005910;2.06e-08;6!UBERON:0001044;6.13e-08;6!UBERON:0003293;6.13e-08;6!UBERON:0003294;6.13e-08;6!UBERON:0010047;6.13e-08;6!UBERON:0003408;6.13e-08;6!UBERON:0000167;6.13e-08;6!UBERON:0001987;8.10e-08;4!UBERON:0000344;8.14e-08;20!UBERON:0001911;8.87e-08;4!UBERON:0000305;2.01e-07;7!UBERON:0002419;3.19e-07;2!UBERON:0007771;3.19e-07;2!UBERON:0003297;3.19e-07;2!UBERON:0001821;3.19e-07;2!UBERON:0003487;3.19e-07;2!UBERON:0001820;3.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.46e-20,14;UBERON:0000158,4.46e-20,14;UBERON:0001737,3.18e-19,9;UBERON:0001004,1.52e-17,74;UBERON:0004119,1.96e-16,160;UBERON:0000925,1.96e-16,160;UBERON:0006595,1.96e-16,160;UBERON:0003124,5.04e-15,7;UBERON:0000166,3.43e-13,22;UBERON:0000161,2.62e-12,36;UBERON:0003102,4.40e-12,99;UBERON:0000165,1.67e-11,29;UBERON:0000930,1.67e-11,29;UBERON:0000478,8.44e-11,24;UBERON:0001557,1.51e-10,19;UBERON:0000365,4.16e-10,5;UBERON:0004923,5.18e-10,66;UBERON:0003729,7.26e-10,13;UBERON:0001949,2.16e-09,3;UBERON:0000033,2.75e-09,56;UBERON:0000920,4.57e-09,3;UBERON:0000065,1.77e-08,54;UBERON:0005910,2.04e-08,6;UBERON:0001444,2.58e-08,49;UBERON:0000153,4.87e-08,62;UBERON:0007811,4.87e-08,62;UBERON:0000344,7.17e-08,20;UBERON:0001044,7.39e-08,6;UBERON:0003293,7.39e-08,6;UBERON:0003294,7.39e-08,6;UBERON:0010047,7.39e-08,6;UBERON:0000167,7.39e-08,6;UBERON:0001987,8.11e-08,4;UBERON:0004340,8.11e-08,4;UBERON:0001911,9.93e-08,4;UBERON:0005333,9.93e-08,4;UBERON:0008425,9.93e-08,4;UBERON:0005311,9.93e-08,4;UBERON:0001007,1.86e-07,145;UBERON:0001555,1.86e-07,145;UBERON:0007026,1.86e-07,145;UBERON:0000305,1.88e-07,7;UBERON:0002419,2.66e-07,2;UBERON:0007771,2.66e-07,2;UBERON:0003297,2.66e-07,2;UBERON:0001821,2.66e-07,2;UBERON:0003487,2.66e-07,2;UBERON:0001820,2.66e-07,2;UBERON:0005089,2.66e-07,2;UBERON:0005088,2.66e-07,2 | |||
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| ||
|short_description=p@chr17:38643498..38643544,+ | |short_description=p@chr17:38643498..38643544,+ | ||
}} | }} |
Latest revision as of 16:30, 25 July 2015
Short description: | p@chr17:38643498..38643544, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38643498..38643544, + |
Coexpression cluster: | C918_Keratinocyte_Mammary_Prostate_Urothelial_salivary_Corneal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.80e-08 | 14 |