FFCP PHASE1:Hg19::chr17:42429493..42429515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:42429493..42429515,+ | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_at_chr17:42429493..42429515,+ | |description=CAGE_peak_at_chr17:42429493..42429515,+ | ||
|id=chr17:42429493..42429515,+ | |id=chr17:42429493..42429515,+ | ||
|ontology_enrichment_celltype=CL:0002009!5.83e-20!65;CL:0000557!9.43e-20!71;CL:0002194!1.06e-19!63;CL:0000576!1.06e-19!63;CL:0000040!1.06e-19!63;CL:0000559!1.06e-19!63;CL:0000839!1.60e-19!70;CL:0002057!9.40e-19!42;CL:0000766!1.42e-17!76;CL:0000860!1.85e-17!45;CL:0000763!2.05e-08!112;CL:0000049!2.05e-08!112;CL:0000063!4.25e-07!578 | |ontology_enrichment_celltype=CL:0002009!5.83e-20!65;CL:0000557!9.43e-20!71;CL:0002194!1.06e-19!63;CL:0000576!1.06e-19!63;CL:0000040!1.06e-19!63;CL:0000559!1.06e-19!63;CL:0000839!1.60e-19!70;CL:0002057!9.40e-19!42;CL:0000766!1.42e-17!76;CL:0000860!1.85e-17!45;CL:0000763!2.05e-08!112;CL:0000049!2.05e-08!112;CL:0000063!4.25e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.48e-30;33!CL:0002057;6.48e-30;33!CL:0000473;7.31e-29;39!CL:0000234;7.31e-29;39!CL:0000576;5.67e-20;48!CL:0000766;1.39e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.74e-34,48;CL:0000234,8.74e-34,48;CL:0002194,5.27e-33,59;CL:0000576,5.27e-33,59;CL:0000040,5.27e-33,59;CL:0000559,5.27e-33,59;CL:0002009,7.68e-33,61;CL:0000557,1.60e-31,67;CL:0000839,8.03e-31,66;CL:0000860,6.85e-29,42;CL:0002057,6.85e-29,42;CL:0000766,1.39e-26,72;CL:0000763,1.68e-14,108;CL:0000049,1.68e-14,108;CL:0002031,1.48e-09,120;CL:0002087,4.16e-09,115;CL:0000738,1.38e-07,136;CL:0002320,3.27e-07,361;CL:0000134,6.39e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-16!80;UBERON:0001474!4.40e-15!86;UBERON:0002405!1.60e-14!115;UBERON:0002193!2.32e-13!112;UBERON:0002390!3.22e-13!102;UBERON:0003061!3.22e-13!102;UBERON:0004765!3.85e-13!101;UBERON:0001434!3.85e-13!101;UBERON:0000926!1.97e-11!448;UBERON:0004120!1.97e-11!448;UBERON:0006603!1.97e-11!448;UBERON:0003081!1.39e-09!216;UBERON:0002204!5.97e-09!167;UBERON:0000468!1.57e-07!659 | |ontology_enrichment_uberon=UBERON:0002371!1.49e-16!80;UBERON:0001474!4.40e-15!86;UBERON:0002405!1.60e-14!115;UBERON:0002193!2.32e-13!112;UBERON:0002390!3.22e-13!102;UBERON:0003061!3.22e-13!102;UBERON:0004765!3.85e-13!101;UBERON:0001434!3.85e-13!101;UBERON:0000926!1.97e-11!448;UBERON:0004120!1.97e-11!448;UBERON:0006603!1.97e-11!448;UBERON:0003081!1.39e-09!216;UBERON:0002204!5.97e-09!167;UBERON:0000468!1.57e-07!659 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.25e-28,76;UBERON:0001474,3.20e-25,82;UBERON:0002405,2.63e-23,93;UBERON:0004765,3.00e-22,90;UBERON:0002390,2.18e-21,98;UBERON:0003061,2.18e-21,98;UBERON:0002193,2.43e-21,108;UBERON:0001434,4.76e-21,100;UBERON:0003081,6.68e-17,203;UBERON:0000926,1.41e-15,315;UBERON:0004120,1.41e-15,315;UBERON:0006603,1.41e-15,315;UBERON:0002204,9.24e-12,167;UBERON:0002384,6.69e-07,371 | |||
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| ||
|short_description=p@chr17:42429493..42429515,+ | |short_description=p@chr17:42429493..42429515,+ | ||
}} | }} |
Latest revision as of 17:25, 25 July 2015
Short description: | p@chr17:42429493..42429515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42429493..42429515, + |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.74e-34 | 48 |
phagocyte | 8.74e-34 | 48 |
monopoietic cell | 5.27e-33 | 59 |
monocyte | 5.27e-33 | 59 |
monoblast | 5.27e-33 | 59 |
promonocyte | 5.27e-33 | 59 |
macrophage dendritic cell progenitor | 7.68e-33 | 61 |
granulocyte monocyte progenitor cell | 1.60e-31 | 67 |
myeloid lineage restricted progenitor cell | 8.03e-31 | 66 |
classical monocyte | 6.85e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.85e-29 | 42 |
myeloid leukocyte | 1.39e-26 | 72 |
myeloid cell | 1.68e-14 | 108 |
common myeloid progenitor | 1.68e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 1.48e-09 | 120 |
nongranular leukocyte | 4.16e-09 | 115 |
leukocyte | 1.38e-07 | 136 |
connective tissue cell | 3.27e-07 | 361 |
mesenchymal cell | 6.39e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.25e-28 | 76 |
bone element | 3.20e-25 | 82 |
immune system | 2.63e-23 | 93 |
skeletal element | 3.00e-22 | 90 |
hematopoietic system | 2.18e-21 | 98 |
blood island | 2.18e-21 | 98 |
hemolymphoid system | 2.43e-21 | 108 |
skeletal system | 4.76e-21 | 100 |
lateral plate mesoderm | 6.68e-17 | 203 |
mesoderm | 1.41e-15 | 315 |
mesoderm-derived structure | 1.41e-15 | 315 |
presumptive mesoderm | 1.41e-15 | 315 |
musculoskeletal system | 9.24e-12 | 167 |
connective tissue | 6.69e-07 | 371 |