FFCP PHASE1:Hg19::chr17:4641746..4641758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:4641746..4641758,- | |||
|coexpression_cluster_id=C641 | |coexpression_cluster_id=C641 | ||
|description=CAGE_peak_at_chr17:4641746..4641758,- | |description=CAGE_peak_at_chr17:4641746..4641758,- | ||
|id=chr17:4641746..4641758,- | |id=chr17:4641746..4641758,- | ||
|ontology_enrichment_celltype=CL:0000860;1.02e-79;33!CL:0002057;1.02e-79;33!CL:0000473;5.17e-62;39!CL:0000234;5.17e-62;39!CL:0000576;5.54e-38;48!CL:0000766;3.11e-24;69!CL:0000763;2.63e-13;100!CL:0000453;1.04e-11;5!CL:0000738;4.84e-10;136!CL:0002087;5.09e-09;104 | |ontology_enrichment_celltype=CL:0002057!3.38e-38!42;CL:0000860!7.39e-35!45;CL:0002009!7.43e-32!65;CL:0002194!2.85e-31!63;CL:0000576!2.85e-31!63;CL:0000040!2.85e-31!63;CL:0000559!2.85e-31!63;CL:0000766!5.72e-30!76;CL:0000557!1.76e-29!71;CL:0000839!2.85e-28!70;CL:0000763!1.29e-20!112;CL:0000049!1.29e-20!112;CL:0000738!3.21e-16!140;CL:0002087!2.44e-13!119;CL:0002031!2.99e-12!124;CL:0000037!1.39e-10!172;CL:0000566!1.39e-10!172;CL:0002032!3.19e-10!165;CL:0000837!3.19e-10!165;CL:0000988!7.23e-10!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.02e-79;33!CL:0002057;1.02e-79;33!CL:0000473;5.17e-62;39!CL:0000234;5.17e-62;39!CL:0000576;5.54e-38;48!CL:0000766;3.11e-24;69!CL:0000763;2.63e-13;100!CL:0000453;1.04e-11;5!CL:0000738;4.84e-10;136!CL:0002087;5.09e-09;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-68,42;CL:0002057,1.14e-68,42;CL:0000473,4.02e-65,48;CL:0000234,4.02e-65,48;CL:0002009,6.26e-54,61;CL:0002194,3.34e-51,59;CL:0000576,3.34e-51,59;CL:0000040,3.34e-51,59;CL:0000559,3.34e-51,59;CL:0000766,2.42e-49,72;CL:0000557,9.18e-49,67;CL:0000839,2.21e-45,66;CL:0000763,3.29e-40,108;CL:0000049,3.29e-40,108;CL:0000738,5.96e-31,136;CL:0002032,2.21e-25,161;CL:0000837,2.21e-25,161;CL:0002031,2.38e-25,120;CL:0002087,2.76e-24,115;CL:0000037,4.08e-24,168;CL:0000988,1.24e-22,177;CL:0000453,1.65e-11,5;CL:0000134,1.06e-08,354;CL:0002320,1.99e-08,361;CL:0000219,1.82e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.20e-53;42!CL:0000049;8.27e-15;108!UBERON:0006242;1.63e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.85e-26!80;UBERON:0001474!2.22e-23!86;UBERON:0002390!3.71e-21!102;UBERON:0003061!3.71e-21!102;UBERON:0002193!4.47e-20!112;UBERON:0004765!5.46e-19!101;UBERON:0001434!5.46e-19!101;UBERON:0002405!7.71e-19!115;UBERON:0002204!3.99e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.60e-42,76;UBERON:0001474,4.13e-39,82;UBERON:0004765,2.92e-35,90;UBERON:0002405,5.50e-34,93;UBERON:0002390,4.94e-32,98;UBERON:0003061,4.94e-32,98;UBERON:0001434,2.64e-31,100;UBERON:0002193,1.16e-28,108;UBERON:0002204,6.29e-17,167;UBERON:0003081,4.27e-13,203;UBERON:0002384,4.69e-08,371;UBERON:0000926,9.31e-07,315;UBERON:0004120,9.31e-07,315;UBERON:0006603,9.31e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,4.9435401185052,1.13362783106643,0.485168122375632,5.11343881192506,2.05583944010913,1.23882548358041,4.31538588483226,1.0246428261164,0.236482229888585,1.37898272294647,0,0,4.89430082810772,1.36453075028923,1.12361742222542,10.1007684482398,0,1.27867425159808,2.63881040149373,1.79517291859469,1.70489900213078,4.06292934080018,1.13477044938228,0,3.51748131359441,1.5644487552606,0.65156653411535,3.02699751316684,1.10483290796269,0.316462387440884,0.845021145247767,0.212604299965044,0,0.336985893439485,0.150176892841506,0,0.570025487482497,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,1.0404181360211,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,1.35359883872224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,1.28071796843612,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,1.1248694577575,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,1.16916185303633,0.930053882193542,1.14495775979091,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.375935671919414,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0.20686599172379,0.426467963801962,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0.201273793591026,0 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| ||
|short_description=p@chr17:4641746..4641758,- | |short_description=p@chr17:4641746..4641758,- | ||
}} | }} |
Latest revision as of 18:04, 25 July 2015
Short description: | p@chr17:4641746..4641758, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4641746..4641758, - |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.14e-68 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-68 | 42 |
defensive cell | 4.02e-65 | 48 |
phagocyte | 4.02e-65 | 48 |
macrophage dendritic cell progenitor | 6.26e-54 | 61 |
monopoietic cell | 3.34e-51 | 59 |
monocyte | 3.34e-51 | 59 |
monoblast | 3.34e-51 | 59 |
promonocyte | 3.34e-51 | 59 |
myeloid leukocyte | 2.42e-49 | 72 |
granulocyte monocyte progenitor cell | 9.18e-49 | 67 |
myeloid lineage restricted progenitor cell | 2.21e-45 | 66 |
myeloid cell | 3.29e-40 | 108 |
common myeloid progenitor | 3.29e-40 | 108 |
leukocyte | 5.96e-31 | 136 |
hematopoietic oligopotent progenitor cell | 2.21e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-25 | 161 |
hematopoietic lineage restricted progenitor cell | 2.38e-25 | 120 |
nongranular leukocyte | 2.76e-24 | 115 |
hematopoietic stem cell | 4.08e-24 | 168 |
hematopoietic cell | 1.24e-22 | 177 |
Langerhans cell | 1.65e-11 | 5 |
mesenchymal cell | 1.06e-08 | 354 |
connective tissue cell | 1.99e-08 | 361 |
motile cell | 1.82e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.60e-42 | 76 |
bone element | 4.13e-39 | 82 |
skeletal element | 2.92e-35 | 90 |
immune system | 5.50e-34 | 93 |
hematopoietic system | 4.94e-32 | 98 |
blood island | 4.94e-32 | 98 |
skeletal system | 2.64e-31 | 100 |
hemolymphoid system | 1.16e-28 | 108 |
musculoskeletal system | 6.29e-17 | 167 |
lateral plate mesoderm | 4.27e-13 | 203 |
connective tissue | 4.69e-08 | 371 |
mesoderm | 9.31e-07 | 315 |
mesoderm-derived structure | 9.31e-07 | 315 |
presumptive mesoderm | 9.31e-07 | 315 |