FFCP PHASE1:Hg19::chr17:55374562..55374566,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:55374562..55374566,+ | |||
|description=CAGE_peak_at_chr17:55374562..55374566,+ | |||
|id=chr17:55374562..55374566,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.39e-08!52;CL:0000542!3.18e-08!53;CL:0000051!3.18e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.88e-11;11!CL:0000623;2.16e-10;3!CL:0000791;6.94e-10;18!CL:0000789;6.94e-10;18!CL:0002419;6.94e-10;18!CL:0000542;2.30e-09;53!CL:0000084;4.69e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.35e-15,52;CL:0000542,1.73e-14,53;CL:0000051,1.73e-14,53;CL:0000625,8.25e-11,11;CL:0000623,1.70e-10,3;CL:0000825,1.70e-10,3;CL:0000791,5.69e-10,18;CL:0000789,5.69e-10,18;CL:0002420,5.69e-10,18;CL:0002419,5.69e-10,18;CL:0000790,5.69e-10,18;CL:0000084,4.08e-07,25;CL:0000827,4.08e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;6.94e-10;18!CL:0000051;2.30e-09;53!UBERON:0000358;7.83e-09;1!UBERON:0005754;2.05e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.14e-18!115;UBERON:0001049!6.67e-12!57;UBERON:0005068!6.67e-12!57;UBERON:0006241!6.67e-12!57;UBERON:0007135!6.67e-12!57;UBERON:0002616!9.05e-12!59;UBERON:0003075!1.39e-11!86;UBERON:0007284!1.39e-11!86;UBERON:0002780!1.41e-11!41;UBERON:0001890!1.41e-11!41;UBERON:0006240!1.41e-11!41;UBERON:0000955!1.71e-11!69;UBERON:0006238!1.71e-11!69;UBERON:0002346!1.94e-11!90;UBERON:0000073!3.11e-11!94;UBERON:0001016!3.11e-11!94;UBERON:0003080!4.73e-11!42;UBERON:0005743!9.60e-11!86;UBERON:0001893!2.91e-10!34;UBERON:0002020!3.66e-10!34;UBERON:0003528!3.66e-10!34;UBERON:0003056!4.89e-10!61;UBERON:0002791!7.63e-10!33;UBERON:0001017!7.71e-10!82;UBERON:0001869!3.64e-09!32;UBERON:0000153!2.24e-08!129;UBERON:0007811!2.24e-08!129;UBERON:0000033!2.53e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;7.83e-09;1!UBERON:0005208;7.83e-09;1!UBERON:0004145;7.83e-09;1!UBERON:0005946;7.83e-09;1!UBERON:0005965;7.83e-09;1!UBERON:0002078;7.83e-09;1!UBERON:0000998;2.05e-08;1!UBERON:0006868;2.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,8.78e-09,1;UBERON:0005208,8.78e-09,1;UBERON:0005946,8.78e-09,1;UBERON:0005965,8.78e-09,1;UBERON:0002078,8.78e-09,1;UBERON:0000998,1.98e-08,1;UBERON:0006868,1.98e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0.164201178899891,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0,0.232401601740905,1.70603078984906,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.32145117339416,0.285012743741249,0,0,0,1.09227722252426,0,0,0,1.14950487990897,0.661044872784862,0,0.569212969109448,0.587237189370939,2.6759125968766,0,0.560508562981536,0,0.983548850569165,1.96505381374582,0.616804496998528,0,0,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.640456598628376,0.520237390239513,0.328875809207352,1.38175008892924,0,0.14828656316206,0,1.04535523804977,0.453237370790265,0,0,0.253019692019503,0,1.30216690771284,0,0,0,0,0,0,2.01606743224732,2.40696176205157,1.30341963494519,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.472674085820339,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,1.32438929824395,0,0,0.109750285408626,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,1.18218456121156,0.431255149719035,1.79680250791648,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0.28853842595289,0.853702120180969,0,0.199579371432817,0.383010740264733,0.211673582723883,0,1.96558024679421,0,0,5.01268954180134,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0.852408440419239,0.23874448473769,0,0,0,0.422008249231538,0,0,4.64475897881586,0,0.552567831062295,0.503865495708552,0.20453736500431,0.738508832766417,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0.185536196323703,1.99613798001194,0.260427761085233,0.174919999992391,0,0,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.241192877250816,0,0.442317039724898,0,0,0.21787692703798,0,0.153900517007594,0,0.46112780877612,0.269272933229316,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0.593042257361244,0.123563938946503,0.104421949505455,0.539209063845416,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0.91821828489147,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.0967563312890851,0.219267951258557,0.164230914106418,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0,0,0.640358984218058,0,0.144090417154106,0,0.343189995723929,0,0.248505071130865,0.235694034616795,0,0.209205692624666,0,0,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0.687481272035051,2.15361907373044,0.399358000997982,0,0.446342914883745,0.134366944973453,0.360299883542404,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0.2249738915515,0,0.121499113316049,0,0.551639951094387,0.367182116944987,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0.638341257770182,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,1.14681839138014,0.332787154610557,0.558867626472451,0,0,0,0,0,0.468334905806882,0.579684114443301,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0.59996218756479,0,0.344429959321631,0,0,0,0,1.02315497042921,0.323474434190045,0.471797825567689,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.70975570501128,0,0,0.3062454773532,0.128458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| |||
|short_description=p@chr17:55374562..55374566,+ | |||
}} |
Latest revision as of 19:10, 25 July 2015
Short description: | p@chr17:55374562..55374566, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:55374562..55374566, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.35e-15 | 52 |
lymphocyte | 1.73e-14 | 53 |
common lymphoid progenitor | 1.73e-14 | 53 |
CD8-positive, alpha-beta T cell | 8.25e-11 | 11 |
natural killer cell | 1.70e-10 | 3 |
pro-NK cell | 1.70e-10 | 3 |
mature alpha-beta T cell | 5.69e-10 | 18 |
alpha-beta T cell | 5.69e-10 | 18 |
immature T cell | 5.69e-10 | 18 |
mature T cell | 5.69e-10 | 18 |
immature alpha-beta T cell | 5.69e-10 | 18 |
T cell | 4.08e-07 | 25 |
pro-T cell | 4.08e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 8.78e-09 | 1 |
right atrium valve | 8.78e-09 | 1 |
outflow tract of atrium | 8.78e-09 | 1 |
outflow part of right atrium | 8.78e-09 | 1 |
right cardiac atrium | 8.78e-09 | 1 |
seminal vesicle | 1.98e-08 | 1 |
seminal fluid secreting gland | 1.98e-08 | 1 |