FFCP PHASE1:Hg19::chr17:62770351..62770363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:62770351..62770363,- | |||
|description=CAGE_peak_at_chr17:62770351..62770363,- | |description=CAGE_peak_at_chr17:62770351..62770363,- | ||
|id=chr17:62770351..62770363,- | |id=chr17:62770351..62770363,- | ||
Latest revision as of 19:55, 25 July 2015
| Short description: | p@chr17:62770351..62770363, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr17:62770351..62770363, - |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr17:62770351..62770363- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.21e-20 | 253 |
| endodermal cell | 8.45e-14 | 58 |
| endo-epithelial cell | 1.27e-10 | 42 |
| epithelial cell of uterus | 4.23e-08 | 6 |
| stromal cell of endometrium | 4.23e-08 | 6 |
| epithelial cell of lung | 3.99e-07 | 19 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelium | 3.69e-15 | 82 |
| endoderm-derived structure | 4.69e-12 | 160 |
| endoderm | 4.69e-12 | 160 |
| presumptive endoderm | 4.69e-12 | 160 |
| digestive system | 5.54e-12 | 145 |
| digestive tract | 5.54e-12 | 145 |
| primitive gut | 5.54e-12 | 145 |
| epithelial bud | 3.38e-11 | 37 |
| subdivision of digestive tract | 1.37e-10 | 118 |
| lung | 9.03e-10 | 22 |
Showing 1 to 10 of 24 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 1.76e-48 | 106 |
| cell type cancer | 3.07e-38 | 143 |
| squamous cell carcinoma | 1.98e-30 | 14 |
| cancer | 5.69e-23 | 235 |
| disease of cellular proliferation | 3.11e-22 | 239 |
| adenocarcinoma | 9.68e-21 | 25 |
| disease of anatomical entity | 1.87e-18 | 39 |
| thoracic cancer | 5.69e-13 | 4 |
| breast cancer | 5.69e-13 | 4 |
| organ system cancer | 5.68e-10 | 137 |
Showing 1 to 10 of 15 entries
