FFCP PHASE1:Hg19::chr17:72524933..72524943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:72524933..72524943,+ | |||
|coexpression_cluster_id=C1163 | |||
|description=CAGE_peak_at_chr17:72524933..72524943,+ | |||
|id=chr17:72524933..72524943,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.46e-78!42;CL:0000860!1.81e-72!45;CL:0000766!4.43e-54!76;CL:0002194!3.82e-49!63;CL:0000576!3.82e-49!63;CL:0000040!3.82e-49!63;CL:0000559!3.82e-49!63;CL:0002009!1.80e-47!65;CL:0000839!1.07e-43!70;CL:0000557!5.27e-43!71;CL:0000738!2.40e-37!140;CL:0000763!1.06e-34!112;CL:0000049!1.06e-34!112;CL:0002087!2.21e-34!119;CL:0000037!4.44e-29!172;CL:0000566!4.44e-29!172;CL:0000988!4.36e-27!182;CL:0002393!1.44e-26!9;CL:0002397!1.44e-26!9;CL:0002031!4.63e-26!124;CL:0002032!7.60e-25!165;CL:0000837!7.60e-25!165;CL:0000842!3.52e-15!3;CL:0000224!1.64e-11!4;CL:0000094!3.29e-10!8;CL:0000134!3.81e-10!358;CL:0002320!8.30e-10!365;CL:0000219!1.29e-08!390;CL:0000080!8.03e-08!6;CL:0000081!1.95e-07!11;CL:0000767!2.74e-07!3;CL:0000048!3.43e-07!430;CL:0000723!5.46e-07!436;CL:0000034!9.96e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.75e-90;6!CL:0002397;1.75e-90;6!CL:0000576;8.12e-21;48!CL:0000766;4.51e-18;69!CL:0000771;3.43e-09;2!CL:0000094;9.13e-09;8!CL:0000860;6.99e-07;33!CL:0002057;6.99e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.28e-60,9;CL:0002397,2.28e-60,9;CL:0000860,3.20e-35,42;CL:0002057,3.20e-35,42;CL:0000473,9.96e-31,48;CL:0000234,9.96e-31,48;CL:0000766,4.73e-29,72;CL:0002194,1.98e-24,59;CL:0000576,1.98e-24,59;CL:0000040,1.98e-24,59;CL:0000559,1.98e-24,59;CL:0002009,1.29e-23,61;CL:0000839,8.56e-22,66;CL:0000557,1.84e-21,67;CL:0000763,3.86e-19,108;CL:0000049,3.86e-19,108;CL:0000738,9.17e-18,136;CL:0002087,7.29e-15,115;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0002032,1.58e-12,161;CL:0000837,1.58e-12,161;CL:0002031,1.14e-11,120;CL:0000771,3.43e-09,2;CL:0000094,8.62e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.24e-47!102;UBERON:0003061!2.24e-47!102;UBERON:0002193!1.48e-42!112;UBERON:0002371!1.51e-37!80;UBERON:0001474!1.55e-34!86;UBERON:0004765!1.48e-28!101;UBERON:0001434!1.48e-28!101;UBERON:0002405!2.26e-24!115;UBERON:0003081!1.01e-18!216;UBERON:0000178!5.81e-15!15;UBERON:0000179!5.81e-15!15;UBERON:0000463!5.81e-15!15;UBERON:0002204!6.02e-15!167;UBERON:0002384!2.40e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.42e-19,76;UBERON:0002390,1.38e-17,98;UBERON:0003061,1.38e-17,98;UBERON:0001474,1.98e-17,82;UBERON:0002193,6.98e-16,108;UBERON:0004765,8.04e-16,90;UBERON:0002405,2.74e-15,93;UBERON:0001434,3.64e-14,100;UBERON:0002204,4.01e-08,167;UBERON:0003081,5.59e-08,203 | |||
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|short_description=p@chr17:72524933..72524943,+ | |||
}} | }} |
Latest revision as of 20:49, 25 July 2015
Short description: | p@chr17:72524933..72524943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:72524933..72524943, + |
Coexpression cluster: | C1163_Eosinophils_Neutrophils_CD14_Basophils_CD14CD16_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.28e-60 | 9 |
CD14-positive, CD16-positive monocyte | 2.28e-60 | 9 |
classical monocyte | 3.20e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.20e-35 | 42 |
defensive cell | 9.96e-31 | 48 |
phagocyte | 9.96e-31 | 48 |
myeloid leukocyte | 4.73e-29 | 72 |
monopoietic cell | 1.98e-24 | 59 |
monocyte | 1.98e-24 | 59 |
monoblast | 1.98e-24 | 59 |
promonocyte | 1.98e-24 | 59 |
macrophage dendritic cell progenitor | 1.29e-23 | 61 |
myeloid lineage restricted progenitor cell | 8.56e-22 | 66 |
granulocyte monocyte progenitor cell | 1.84e-21 | 67 |
myeloid cell | 3.86e-19 | 108 |
common myeloid progenitor | 3.86e-19 | 108 |
leukocyte | 9.17e-18 | 136 |
nongranular leukocyte | 7.29e-15 | 115 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.58e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
eosinophil | 3.43e-09 | 2 |
granulocyte | 8.62e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.42e-19 | 76 |
hematopoietic system | 1.38e-17 | 98 |
blood island | 1.38e-17 | 98 |
bone element | 1.98e-17 | 82 |
hemolymphoid system | 6.98e-16 | 108 |
skeletal element | 8.04e-16 | 90 |
immune system | 2.74e-15 | 93 |
skeletal system | 3.64e-14 | 100 |
musculoskeletal system | 4.01e-08 | 167 |
lateral plate mesoderm | 5.59e-08 | 203 |