FFCP PHASE1:Hg19::chr17:7748946..7748974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=73bp_to_AB383855_5end | |association_with_transcript=73bp_to_AB383855_5end | ||
|cluster_id=chr17:7748946..7748974,+ | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_1_at_AB383855_5end | |description=CAGE_peak_1_at_AB383855_5end | ||
|id=chr17:7748946..7748974,+ | |id=chr17:7748946..7748974,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.14e-18!42;CL:0000860!2.29e-17!45;CL:0000766!2.41e-11!76;CL:0000557!8.74e-11!71;CL:0002009!3.61e-10!65;CL:0000839!1.50e-09!70;CL:0002194!2.13e-09!63;CL:0000576!2.13e-09!63;CL:0000040!2.13e-09!63;CL:0000559!2.13e-09!63;CL:0000738!4.90e-09!140;CL:0000763!2.12e-07!112;CL:0000049!2.12e-07!112;CL:0000988!2.83e-07!182;CL:0002087!3.51e-07!119;CL:0002031!4.19e-07!124 | |ontology_enrichment_celltype=CL:0002057!1.14e-18!42;CL:0000860!2.29e-17!45;CL:0000766!2.41e-11!76;CL:0000557!8.74e-11!71;CL:0002009!3.61e-10!65;CL:0000839!1.50e-09!70;CL:0002194!2.13e-09!63;CL:0000576!2.13e-09!63;CL:0000040!2.13e-09!63;CL:0000559!2.13e-09!63;CL:0000738!4.90e-09!140;CL:0000763!2.12e-07!112;CL:0000049!2.12e-07!112;CL:0000988!2.83e-07!182;CL:0002087!3.51e-07!119;CL:0002031!4.19e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.63e-59;33!CL:0002057;1.63e-59;33!CL:0000473;8.08e-43;39!CL:0000234;8.08e-43;39!CL:0000576;3.47e-32;48!CL:0000766;6.71e-23;69!CL:0000763;3.49e-10;100!CL:0002087;9.86e-10;104!CL:0000775;1.86e-08;3!CL:0000738;4.04e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.32e-60,42;CL:0002057,2.32e-60,42;CL:0000473,6.51e-55,48;CL:0000234,6.51e-55,48;CL:0000766,1.19e-44,72;CL:0002009,9.34e-43,61;CL:0002194,7.84e-42,59;CL:0000576,7.84e-42,59;CL:0000040,7.84e-42,59;CL:0000559,7.84e-42,59;CL:0000557,1.01e-40,67;CL:0000839,5.18e-39,66;CL:0000763,1.06e-27,108;CL:0000049,1.06e-27,108;CL:0000738,2.95e-26,136;CL:0002087,2.45e-23,115;CL:0002031,3.32e-22,120;CL:0000988,2.25e-20,177;CL:0000037,6.41e-19,168;CL:0002032,4.19e-18,161;CL:0000837,4.19e-18,161;CL:0000775,1.25e-08,3;CL:0000219,8.76e-08,386;CL:0002320,3.40e-07,361;CL:0000134,4.20e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-44;42!CL:0000049;2.16e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.88e-13!102;UBERON:0003061!3.88e-13!102;UBERON:0002193!7.93e-12!112;UBERON:0002371!9.74e-09!80;UBERON:0001474!1.11e-08!86;UBERON:0002405!5.36e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!3.88e-13!102;UBERON:0003061!3.88e-13!102;UBERON:0002193!7.93e-12!112;UBERON:0002371!9.74e-09!80;UBERON:0001474!1.11e-08!86;UBERON:0002405!5.36e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.44e-07;15!UBERON:0000179;8.44e-07;15!UBERON:0000463;8.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.43e-39,98;UBERON:0003061,9.43e-39,98;UBERON:0002371,1.09e-34,76;UBERON:0002193,4.97e-34,108;UBERON:0001474,2.11e-31,82;UBERON:0002405,4.03e-28,93;UBERON:0004765,1.06e-27,90;UBERON:0001434,6.49e-24,100;UBERON:0003081,7.28e-19,203;UBERON:0002204,3.34e-11,167;UBERON:0000926,8.84e-09,315;UBERON:0004120,8.84e-09,315;UBERON:0006603,8.84e-09,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,1.02000345622126,0.626909442956176,0,0.273748850145768,0,0.993374274723366,0.492603536699674,0.472264687882075,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0.426507697462265,0,2.21598163412751,2.00544447470142,1.08505435357926,0,0,0,4.07115068582781,1.88937971844405,2.18325655069035,6.0431549595478,6.98985409637104,6.81354015969228,17.5492359316512,5.89169625016932,2.60130452877444,9.99762474136194,6.45484683583826,13.5426486594342,6.96496656307637,4.63940455098338,2.02251136000576,24.7927952820431,4.8139354061414,17.2621023965741,2.96866170168044,2.39356389145958,1.70489900213078,18.5733912722294,16.4541715160431,8.09668923694247,7.03496262718881,7.30076085788282,4.12658804939722,11.502590550034,7.73383035573886,4.1140110367315,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,2.6759125968766,0,1.12101712596307,0.263384084775077,0.786839080455332,3.14408610199332,0.822405995998037,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0.260118695119756,0,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.351339142772504,0.458426764241994,0.364295288292542,0,0,0,0.26591592103773,0.476981248610684,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0.805658634218294,0,1.22031028774085,0.735326160691737,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0.872188104285069,0,0,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0.538842688278752,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0.538168907066586,0,0.211931901159562,0,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0,0,0.487894824518382,0.132529768321485,0.813357600086629,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.100528972411631,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0.858486162094873,0,0,0.148631162288728,0,0.503946384596579,0.425325291727159,0.268675568108545,0.290633938513962,0.383382679165211,45.3250178864268,0.264145302039678,0.414656231081544,0.720599767084807,0.37872730027914,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0.857867961948885,0,0,0,1.42156779497018,0,0,0,0.399891964728228,0,0.502257091432126,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0.112085143993527,0.591092280605782,0.862510299438069,1.02674429023799,0,0,1.54657762555539,0.167516265334349,0,5.24304916763028,20.9413021442817,1.65766205374414,0.49076596687656,0,0,0.831883446123229,0.356857977594324,0.473107245101804,0.234282829985426,0,0,0,0,0,0.173767228936166,0.587403472388222,1.02943027143257,1.03384013061444,0.862856803274467,1.38745825144478,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0.483437798366489,0.40101294060657,0.460404944679482,0.114814448164607,0.364182336013434,0,0,0.15403067420883,0.784349769176855,0,0.73886140225013,0,0.170093705276516,0.647747748306418,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,1.30151357865721,0.206082023295445,0.366277859273374,0,0.574265537996172,0,0,0.386682873168488,0,0.460511024178389,0,0.107420244868274,0,0,0.623224249527161,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0.424216295861138,1.13008116620243,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0.699869440489966,0.192444225451024,0,1.08890984861323,0.282431402330337,0.86101074534246,0,0.443430153536676,1.37834040124176,1.01489521846434,0.764637207142375,5.12682468456746,1.19115887728894,0.822724546172388,1.29694662238543,0.5400314372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|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,1.02000345622126,0.626909442956176,0,0.273748850145768,0,0.993374274723366,0.492603536699674,0.472264687882075,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0.426507697462265,0,2.21598163412751,2.00544447470142,1.08505435357926,0,0,0,4.07115068582781,1.88937971844405,2.18325655069035,6.0431549595478,6.98985409637104,6.81354015969228,17.5492359316512,5.89169625016932,2.60130452877444,9.99762474136194,6.45484683583826,13.5426486594342,6.96496656307637,4.63940455098338,2.02251136000576,24.7927952820431,4.8139354061414,17.2621023965741,2.96866170168044,2.39356389145958,1.70489900213078,18.5733912722294,16.4541715160431,8.09668923694247,7.03496262718881,7.30076085788282,4.12658804939722,11.502590550034,7.73383035573886,4.1140110367315,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,2.6759125968766,0,1.12101712596307,0.263384084775077,0.786839080455332,3.14408610199332,0.822405995998037,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0.260118695119756,0,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.351339142772504,0.458426764241994,0.364295288292542,0,0,0,0.26591592103773,0.476981248610684,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0.805658634218294,0,1.22031028774085,0.735326160691737,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0.872188104285069,0,0,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0.538842688278752,0.326923806226917,0.302714855289863,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0.538168907066586,0,0.211931901159562,0,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0,0,0.487894824518382,0.132529768321485,0.813357600086629,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.100528972411631,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0.858486162094873,0,0,0.148631162288728,0,0.503946384596579,0.425325291727159,0.268675568108545,0.290633938513962,0.383382679165211,45.3250178864268,0.264145302039678,0.414656231081544,0.720599767084807,0.37872730027914,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0.857867961948885,0,0,0,1.42156779497018,0,0,0,0.399891964728228,0,0.502257091432126,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0.112085143993527,0.591092280605782,0.862510299438069,1.02674429023799,0,0,1.54657762555539,0.167516265334349,0,5.24304916763028,20.9413021442817,1.65766205374414,0.49076596687656,0,0,0.831883446123229,0.356857977594324,0.473107245101804,0.234282829985426,0,0,0,0,0,0.173767228936166,0.587403472388222,1.02943027143257,1.03384013061444,0.862856803274467,1.38745825144478,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0.483437798366489,0.40101294060657,0.460404944679482,0.114814448164607,0.364182336013434,0,0,0.15403067420883,0.784349769176855,0,0.73886140225013,0,0.170093705276516,0.647747748306418,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,1.30151357865721,0.206082023295445,0.366277859273374,0,0.574265537996172,0,0,0.386682873168488,0,0.460511024178389,0,0.107420244868274,0,0,0.623224249527161,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0.424216295861138,1.13008116620243,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0.699869440489966,0.192444225451024,0,1.08890984861323,0.282431402330337,0.86101074534246,0,0.443430153536676,1.37834040124176,1.01489521846434,0.764637207142375,5.12682468456746,1.19115887728894,0.822724546172388,1.29694662238543,0.5400314372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| ||
|short_description=p1@AB383855 | |short_description=p1@AB383855 | ||
}} | }} |
Latest revision as of 22:20, 25 July 2015
Short description: | p1@AB383855 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB383855_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | 73bp_to_AB383855_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.32e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-60 | 42 |
defensive cell | 6.51e-55 | 48 |
phagocyte | 6.51e-55 | 48 |
myeloid leukocyte | 1.19e-44 | 72 |
macrophage dendritic cell progenitor | 9.34e-43 | 61 |
monopoietic cell | 7.84e-42 | 59 |
monocyte | 7.84e-42 | 59 |
monoblast | 7.84e-42 | 59 |
promonocyte | 7.84e-42 | 59 |
granulocyte monocyte progenitor cell | 1.01e-40 | 67 |
myeloid lineage restricted progenitor cell | 5.18e-39 | 66 |
myeloid cell | 1.06e-27 | 108 |
common myeloid progenitor | 1.06e-27 | 108 |
leukocyte | 2.95e-26 | 136 |
nongranular leukocyte | 2.45e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 3.32e-22 | 120 |
hematopoietic cell | 2.25e-20 | 177 |
hematopoietic stem cell | 6.41e-19 | 168 |
hematopoietic oligopotent progenitor cell | 4.19e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.19e-18 | 161 |
neutrophil | 1.25e-08 | 3 |
motile cell | 8.76e-08 | 386 |
connective tissue cell | 3.40e-07 | 361 |
mesenchymal cell | 4.20e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.43e-39 | 98 |
blood island | 9.43e-39 | 98 |
bone marrow | 1.09e-34 | 76 |
hemolymphoid system | 4.97e-34 | 108 |
bone element | 2.11e-31 | 82 |
immune system | 4.03e-28 | 93 |
skeletal element | 1.06e-27 | 90 |
skeletal system | 6.49e-24 | 100 |
lateral plate mesoderm | 7.28e-19 | 203 |
musculoskeletal system | 3.34e-11 | 167 |
mesoderm | 8.84e-09 | 315 |
mesoderm-derived structure | 8.84e-09 | 315 |
presumptive mesoderm | 8.84e-09 | 315 |