FFCP PHASE1:Hg19::chr17:7749921..7749951,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7749921..7749951,+
|short_description=p@chr17:7749921..7749951,+
|description=CAGE_peak_at_chr17:7749921..7749951,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7749921..7749951,+ | |||
|coexpression_cluster_id=C844 | |||
|description=CAGE_peak_at_chr17:7749921..7749951,+ | |||
|id=chr17:7749921..7749951,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.20e-24!42;CL:0000860!2.48e-22!45;CL:0000766!3.16e-19!76;CL:0000738!4.06e-15!140;CL:0000557!9.47e-15!71;CL:0000839!2.15e-14!70;CL:0002194!1.98e-13!63;CL:0000576!1.98e-13!63;CL:0000040!1.98e-13!63;CL:0000559!1.98e-13!63;CL:0002009!2.48e-13!65;CL:0000763!1.68e-12!112;CL:0000049!1.68e-12!112;CL:0000037!6.00e-12!172;CL:0000566!6.00e-12!172;CL:0000988!9.46e-12!182;CL:0002031!9.61e-12!124;CL:0002087!1.96e-11!119;CL:0002032!2.40e-11!165;CL:0000837!2.40e-11!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.81e-79;33!CL:0002057;5.81e-79;33!CL:0000473;6.99e-53;39!CL:0000234;6.99e-53;39!CL:0000576;1.30e-37;48!CL:0000766;3.98e-28;69!CL:0000775;4.63e-15;3!CL:0000763;2.15e-13;100!CL:0000081;1.99e-10;11!CL:0002087;7.30e-10;104!CL:0000094;1.26e-09;8!CL:0000738;8.95e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.12e-72,42;CL:0002057,7.12e-72,42;CL:0000473,3.91e-62,48;CL:0000234,3.91e-62,48;CL:0000766,8.53e-57,72;CL:0002194,1.70e-48,59;CL:0000576,1.70e-48,59;CL:0000040,1.70e-48,59;CL:0000559,1.70e-48,59;CL:0002009,9.77e-47,61;CL:0000839,1.42e-46,66;CL:0000557,8.49e-46,67;CL:0000763,9.24e-36,108;CL:0000049,9.24e-36,108;CL:0000738,4.88e-27,136;CL:0002031,5.35e-23,120;CL:0002087,3.68e-22,115;CL:0002032,8.49e-22,161;CL:0000837,8.49e-22,161;CL:0000988,1.04e-20,177;CL:0000037,1.31e-20,168;CL:0000775,4.75e-15,3;CL:0000081,2.18e-10,11;CL:0000094,1.27e-09,8;CL:0000134,6.70e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-51;42!CL:0000049;1.57e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.60e-16!102;UBERON:0003061!4.60e-16!102;UBERON:0002193!4.94e-14!112;UBERON:0002371!3.24e-11!80;UBERON:0001474!1.89e-10!86;UBERON:0007023!3.28e-09!115;UBERON:0004765!4.84e-08!101;UBERON:0001434!4.84e-08!101;UBERON:0002405!1.01e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-39,76;UBERON:0002390,4.28e-37,98;UBERON:0003061,4.28e-37,98;UBERON:0001474,2.17e-36,82;UBERON:0002193,4.51e-33,108;UBERON:0004765,1.22e-32,90;UBERON:0002405,2.13e-31,93;UBERON:0001434,8.66e-29,100;UBERON:0003081,4.39e-17,203;UBERON:0002204,7.87e-15,167;UBERON:0000926,2.40e-09,315;UBERON:0004120,2.40e-09,315;UBERON:0006603,2.40e-09,315 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.229240217243854,0.246301768349837,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0,0,3.20871115952227,0.434021741431704,0,0,0.257575567634187,1.45398238779565,0.755751887377619,0.727752183563449,3.0215774797739,5.75635043230556,4.02618282163635,5.17846306179871,2.30544635876191,1.89185783910868,5.17118521104928,9.68227025375739,9.47985406160392,2.63539275359647,2.72906150057846,0.224723484445085,9.48860066349798,8.66508373105453,17.9014395223732,0.659702600373432,1.99463657621632,2.13112375266347,6.67481248845743,5.6738522469114,9.9651559839292,4.01997864410789,5.73631210262222,0.65156653411535,5.44859552370032,2.94622108790052,1.58231193720442,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0.393010762749165,0.616804496998528,0,0.651844533267181,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.444859689486181,0,0,0,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0.364295288292542,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,24.1404986569012,0,0.621984346622316,0.720599767084807,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0,0,2.24702107184155,8.97484377612075,2.48649308061621,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.689170200620878,1.52234282769651,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0.962479855263359,0.245040215981032,0,0,0.213425530045242,0.159426272728822,0,0,0.211673582723883,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.242721043499027,0,0,0.23874448473769,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.828851746593443,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,1.10579259931225,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0,0,0.269272933229316,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.503464760927528,0,0.158936578980379,0,0,0,0,0,0.707660516026713,1.22206028986725,1.18608451472249,0.123563938946503,0.208843899010911,0.134802265961354,0,0,0,0,0,0,0,0.61214552326098,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0.146178634172371,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0.240476460754601,0.213452994739353,0.999048047910651,0.144090417154106,0,0.171594997861965,0.288109595976299,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0.858452096273142,0.669514372325618,0.134366944973453,0,0,0.0787831823072236,0.247247575143499,0,0.196854963029498,0.0846733320657845,0,0.136203406111576,0,0,1.24632101408756,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.39669780522807,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.122026264901963,0,0,0.554645257684261,0,0,0,0.151649117541648,0.856396000634902,0,0.468334905806882,0.28984205722165,0.149254802886874,0,0,0,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| ||
|short_description=p@chr17:7749921..7749951,+ | |||
}} | }} |
Latest revision as of 22:20, 25 July 2015
Short description: | p@chr17:7749921..7749951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7749921..7749951, + |
Coexpression cluster: | C844_Mast_CD14_immature_Eosinophils_carcinoid_Natural_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.12e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.12e-72 | 42 |
defensive cell | 3.91e-62 | 48 |
phagocyte | 3.91e-62 | 48 |
myeloid leukocyte | 8.53e-57 | 72 |
monopoietic cell | 1.70e-48 | 59 |
monocyte | 1.70e-48 | 59 |
monoblast | 1.70e-48 | 59 |
promonocyte | 1.70e-48 | 59 |
macrophage dendritic cell progenitor | 9.77e-47 | 61 |
myeloid lineage restricted progenitor cell | 1.42e-46 | 66 |
granulocyte monocyte progenitor cell | 8.49e-46 | 67 |
myeloid cell | 9.24e-36 | 108 |
common myeloid progenitor | 9.24e-36 | 108 |
leukocyte | 4.88e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 5.35e-23 | 120 |
nongranular leukocyte | 3.68e-22 | 115 |
hematopoietic oligopotent progenitor cell | 8.49e-22 | 161 |
hematopoietic multipotent progenitor cell | 8.49e-22 | 161 |
hematopoietic cell | 1.04e-20 | 177 |
hematopoietic stem cell | 1.31e-20 | 168 |
neutrophil | 4.75e-15 | 3 |
blood cell | 2.18e-10 | 11 |
granulocyte | 1.27e-09 | 8 |
mesenchymal cell | 6.70e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-39 | 76 |
hematopoietic system | 4.28e-37 | 98 |
blood island | 4.28e-37 | 98 |
bone element | 2.17e-36 | 82 |
hemolymphoid system | 4.51e-33 | 108 |
skeletal element | 1.22e-32 | 90 |
immune system | 2.13e-31 | 93 |
skeletal system | 8.66e-29 | 100 |
lateral plate mesoderm | 4.39e-17 | 203 |
musculoskeletal system | 7.87e-15 | 167 |
mesoderm | 2.40e-09 | 315 |
mesoderm-derived structure | 2.40e-09 | 315 |
presumptive mesoderm | 2.40e-09 | 315 |