FFCP PHASE1:Hg19::chr18:19750173..19750208,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:19750173..19750208,+
|short_description=p@chr18:19750173..19750208,+
|description=CAGE_peak_at_chr18:19750173..19750208,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:19750173..19750208,+ | |||
|description=CAGE_peak_at_chr18:19750173..19750208,+ | |||
|id=chr18:19750173..19750208,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;4.57e-11;6!CL:0000632;2.24e-10;3!CL:0002568;3.32e-08;1!CL:0002581;3.32e-08;1!CL:0000306;8.51e-08;4!CL:0002222;8.51e-08;4!CL:0002224;8.51e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,8.20e-11,6;CL:0000632,1.70e-10,3;CL:0002581,2.17e-08,1;CL:0002568,7.16e-08,1;CL:0000306,9.46e-08,4;CL:0002222,9.46e-08,4;CL:0002224,9.46e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;9.77e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;3.32e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.50e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003914!3.16e-13!118;UBERON:0000490!1.14e-09!138;UBERON:0004872!5.06e-09!84;UBERON:0001009!1.09e-08!113;UBERON:0002049!1.51e-08!79;UBERON:0007798!1.51e-08!79;UBERON:0004535!4.96e-08!110;UBERON:0001048!1.13e-07!168;UBERON:0009497!1.29e-07!25;UBERON:0000015!1.29e-07!25;UBERON:0002423!1.29e-07!25;UBERON:0006235!1.29e-07!25;UBERON:0004161!1.29e-07!25;UBERON:0001981!1.65e-07!60;UBERON:0007500!1.65e-07!60;UBERON:0004537!1.65e-07!60;UBERON:0006965!1.65e-07!60;UBERON:0000483!3.13e-07!309;UBERON:0000055!5.55e-07!69;UBERON:0000119!5.92e-07!312;UBERON:0005256!5.92e-07!143;UBERON:0007100!7.83e-07!27;UBERON:0003104!8.40e-07!238;UBERON:0009142!8.40e-07!238;UBERON:0008835!8.62e-07!22;UBERON:0003894!8.62e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;4.57e-11;6!UBERON:0003104;1.48e-09;7!UBERON:0009142;1.48e-09;7!UBERON:0010077;8.51e-08;4!UBERON:0005389;8.51e-08;4!UBERON:0000484;8.51e-08;4!UBERON:0000965;8.51e-08;4!UBERON:0001803;8.51e-08;4!UBERON:0002331;8.03e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,8.20e-11,6;UBERON:0010077,9.46e-08,4;UBERON:0005389,9.46e-08,4;UBERON:0000484,9.46e-08,4;UBERON:0002546,9.46e-08,4;UBERON:0000965,9.46e-08,4;UBERON:0001803,9.46e-08,4;UBERON:0003073,9.46e-08,4;UBERON:0005426,9.46e-08,4 | |||
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| ||
|short_description=p@chr18:19750173..19750208,+ | |||
}} | }} |
Latest revision as of 23:53, 25 July 2015
Short description: | p@chr18:19750173..19750208, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19750173..19750208, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 8.20e-11 | 6 |
hepatic stellate cell | 1.70e-10 | 3 |
perirenal preadipocyte | 2.17e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 7.16e-08 | 1 |
crystallin accumulating cell | 9.46e-08 | 4 |
vertebrate lens cell | 9.46e-08 | 4 |
lens epithelial cell | 9.46e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 8.20e-11 | 6 |
cuboidal epithelium | 9.46e-08 | 4 |
transparent eye structure | 9.46e-08 | 4 |
simple cuboidal epithelium | 9.46e-08 | 4 |
cranial placode | 9.46e-08 | 4 |
lens of camera-type eye | 9.46e-08 | 4 |
epithelium of lens | 9.46e-08 | 4 |
lens placode | 9.46e-08 | 4 |
lens vesicle | 9.46e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.50e-08 | 1 |