FFCP PHASE1:Hg19::chr18:21484533..21484572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21484533..21484572,+ | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21484533..21484572,+ | |description=CAGE_peak_at_chr18:21484533..21484572,+ | ||
|id=chr18:21484533..21484572,+ | |id=chr18:21484533..21484572,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.96e-24!254;CL:0002076!1.17e-22!43;CL:0000223!6.13e-14!59;CL:0002368!7.92e-13!13;CL:0002159!2.26e-09!13;CL:0002251!2.92e-09!21;CL:0002202!1.86e-07!9;CL:0002632!1.86e-07!9;CL:0000076!6.09e-07!62 | |ontology_enrichment_celltype=CL:0000066!1.96e-24!254;CL:0002076!1.17e-22!43;CL:0000223!6.13e-14!59;CL:0002368!7.92e-13!13;CL:0002159!2.26e-09!13;CL:0002251!2.92e-09!21;CL:0002202!1.86e-07!9;CL:0002632!1.86e-07!9;CL:0000076!6.09e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.00e-25;42!CL:0002368;2.58e-19;13!CL:0000349;1.26e-16;19!CL:0002159;6.66e-15;14!CL:0002621;8.74e-14;3!CL:0000622;9.32e-14;5!CL:0002577;3.49e-13;3!CL:0000362;3.18e-12;9!CL:0000240;4.16e-12;6!CL:0000311;4.16e-12;6!CL:0000079;4.16e-12;6!CL:0000237;4.16e-12;6!CL:0000154;1.76e-11;6!CL:0002327;1.58e-10;4!CL:0000317;8.61e-10;2!CL:1000448;8.61e-10;2!CL:0002308;8.61e-10;2!CL:0002140;8.61e-10;2!CL:0002251;2.05e-09;20!CL:0002536;4.25e-09;2!CL:0000312;1.11e-08;5!CL:0000150;1.13e-07;9!CL:0002077;1.19e-07;34!CL:0002202;2.62e-07;9!CL:0002632;2.62e-07;9!CL:0002166;3.74e-07;3!CL:0002541;5.80e-07;3!CL:0002231;6.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.51e-31,42;CL:0000223,1.40e-21,58;CL:0000066,1.21e-19,253;CL:0002368,3.41e-19,13;CL:0000349,1.04e-16,19;CL:0002159,6.53e-15,14;CL:0002621,7.21e-14,3;CL:0000622,9.48e-14,5;CL:0002577,3.08e-13,3;CL:0000362,3.11e-12,9;CL:0000240,3.71e-12,6;CL:0000311,3.71e-12,6;CL:0000079,3.71e-12,6;CL:0000237,3.71e-12,6;CL:0000036,3.71e-12,6;CL:0000357,3.71e-12,6;CL:0000114,3.71e-12,6;CL:0000154,1.78e-11,6;CL:0002327,1.63e-10,4;CL:0000317,8.62e-10,2;CL:1000448,8.62e-10,2;CL:0002308,8.62e-10,2;CL:0002140,8.62e-10,2;CL:0002251,1.74e-09,20;CL:0002536,3.24e-09,2;CL:0002077,7.08e-09,34;CL:0000312,1.08e-08,5;CL:0000150,1.14e-07,9;CL:0002202,3.14e-07,9;CL:0002632,3.14e-07,9;CL:0002166,3.74e-07,3;CL:0002541,5.64e-07,3;CL:0002231,6.15e-07,3;CL:0002321,9.61e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;4.16e-12;6!CL:0000114;4.16e-12;6!CL:0000223;1.51e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!2.49e-10!14;DOID:305!1.03e-09!106 | |ontology_enrichment_disease=DOID:1749!2.49e-10!14;DOID:305!1.03e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.60e-12!14;UBERON:0000158!1.60e-12!14;UBERON:0004119!6.49e-12!169;UBERON:0000925!6.49e-12!169;UBERON:0006595!6.49e-12!169;UBERON:0003124!3.29e-11!7;UBERON:0005153!2.54e-10!37;UBERON:0001004!5.20e-09!72;UBERON:0005157!1.54e-08!51;UBERON:0000065!3.09e-07!53;UBERON:0001007!3.19e-07!155;UBERON:0001555!3.19e-07!155;UBERON:0007026!3.19e-07!155;UBERON:0005795!3.59e-07!22;UBERON:0001987!4.86e-07!4;UBERON:0004340!4.86e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!1.60e-12!14;UBERON:0000158!1.60e-12!14;UBERON:0004119!6.49e-12!169;UBERON:0000925!6.49e-12!169;UBERON:0006595!6.49e-12!169;UBERON:0003124!3.29e-11!7;UBERON:0005153!2.54e-10!37;UBERON:0001004!5.20e-09!72;UBERON:0005157!1.54e-08!51;UBERON:0000065!3.09e-07!53;UBERON:0001007!3.19e-07!155;UBERON:0001555!3.19e-07!155;UBERON:0007026!3.19e-07!155;UBERON:0005795!3.59e-07!22;UBERON:0001987!4.86e-07!4;UBERON:0004340!4.86e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.86e-15;10!UBERON:0000158;4.86e-15;10!UBERON:0001949;8.74e-14;3!UBERON:0000478;8.02e-13;24!UBERON:0001911;1.58e-10;4!UBERON:0001987;5.24e-10;4!UBERON:0000305;7.39e-10;7!UBERON:0002419;8.61e-10;2!UBERON:0007771;8.61e-10;2!UBERON:0003297;8.61e-10;2!UBERON:0001821;8.61e-10;2!UBERON:0003487;8.61e-10;2!UBERON:0001820;8.61e-10;2!UBERON:0010371;9.43e-10;31!UBERON:0003729;5.10e-08;13!UBERON:0000161;2.17e-07;19!UBERON:0000166;2.17e-07;19!UBERON:0004923;2.35e-07;55!UBERON:0001003;3.39e-07;15!UBERON:0007376;3.39e-07;15!UBERON:0000344;4.95e-07;20!UBERON:0003124;5.80e-07;3!UBERON:0000920;5.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.89e-23,14;UBERON:0000158,2.89e-23,14;UBERON:0003124,2.49e-15,7;UBERON:0001949,7.21e-14,3;UBERON:0000478,6.92e-13,24;UBERON:0004923,4.45e-11,66;UBERON:0001911,1.63e-10,4;UBERON:0005333,1.63e-10,4;UBERON:0008425,1.63e-10,4;UBERON:0005311,1.63e-10,4;UBERON:0001987,4.78e-10,4;UBERON:0004340,4.78e-10,4;UBERON:0000305,6.43e-10,7;UBERON:0002419,8.62e-10,2;UBERON:0007771,8.62e-10,2;UBERON:0003297,8.62e-10,2;UBERON:0001821,8.62e-10,2;UBERON:0003487,8.62e-10,2;UBERON:0001820,8.62e-10,2;UBERON:0005089,8.62e-10,2;UBERON:0005088,8.62e-10,2;UBERON:0001004,3.04e-09,74;UBERON:0000076,9.72e-09,8;UBERON:0004871,1.10e-08,8;UBERON:0003729,4.21e-08,13;UBERON:0003102,1.29e-07,99;UBERON:0004119,1.78e-07,160;UBERON:0000925,1.78e-07,160;UBERON:0006595,1.78e-07,160;UBERON:0001003,3.34e-07,15;UBERON:0007376,3.34e-07,15;UBERON:0007383,3.34e-07,15;UBERON:0000344,4.65e-07,20;UBERON:0000920,5.64e-07,3;UBERON:0003100,9.77e-07,41 | |||
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| ||
|short_description=p@chr18:21484533..21484572,+ | |short_description=p@chr18:21484533..21484572,+ | ||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21484533..21484572, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21484533..21484572, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.89e-23 | 14 |
membranous layer | 2.89e-23 | 14 |
chorion | 2.49e-15 | 7 |
gingival epithelium | 7.21e-14 | 3 |
extraembryonic structure | 6.92e-13 | 24 |
organ component layer | 4.45e-11 | 66 |
mammary gland | 1.63e-10 | 4 |
mammary bud | 1.63e-10 | 4 |
mammary ridge | 1.63e-10 | 4 |
mammary placode | 1.63e-10 | 4 |
placenta | 4.78e-10 | 4 |
allantois | 4.78e-10 | 4 |
amnion | 6.43e-10 | 7 |
skin gland | 8.62e-10 | 2 |
epidermis gland | 8.62e-10 | 2 |
gland of integumental system | 8.62e-10 | 2 |
sebaceous gland | 8.62e-10 | 2 |
skin sebaceous gland | 8.62e-10 | 2 |
sweat gland | 8.62e-10 | 2 |
sweat gland placode | 8.62e-10 | 2 |
sebaceous gland placode | 8.62e-10 | 2 |
respiratory system | 3.04e-09 | 74 |
external ectoderm | 9.72e-09 | 8 |
somatic layer of lateral plate mesoderm | 1.10e-08 | 8 |
mouth mucosa | 4.21e-08 | 13 |
surface structure | 1.29e-07 | 99 |
endoderm-derived structure | 1.78e-07 | 160 |
endoderm | 1.78e-07 | 160 |
presumptive endoderm | 1.78e-07 | 160 |
skin epidermis | 3.34e-07 | 15 |
outer epithelium | 3.34e-07 | 15 |
enveloping layer of ectoderm | 3.34e-07 | 15 |
mucosa | 4.65e-07 | 20 |
egg chorion | 5.64e-07 | 3 |
female organism | 9.77e-07 | 41 |