FFCP PHASE1:Hg19::chr18:43589325..43589328,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:43589325..43589328,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr18:43589325..43589328,- | |description=CAGE_peak_at_chr18:43589325..43589328,- | ||
|id=chr18:43589325..43589328,- | |id=chr18:43589325..43589328,- | ||
|ontology_enrichment_celltype=CL:0000860;2.15e-44;33!CL:0002057;2.15e-44;33!CL:0000473;1.67e-33;39!CL:0000234;1.67e-33;39!CL:0000576;1.93e-29;48!CL:0000766;6.94e-18;69!CL:0000763;9.12e-10;100!CL:0002087;2.38e-08;104 | |ontology_enrichment_celltype=CL:0000763!7.96e-32!112;CL:0000049!7.96e-32!112;CL:0002057!2.01e-30!42;CL:0000839!2.02e-28!70;CL:0000766!3.19e-28!76;CL:0000860!1.45e-27!45;CL:0002194!3.34e-27!63;CL:0000576!3.34e-27!63;CL:0000040!3.34e-27!63;CL:0000559!3.34e-27!63;CL:0000557!2.63e-26!71;CL:0002009!6.26e-26!65;CL:0000037!5.14e-21!172;CL:0000566!5.14e-21!172;CL:0002032!6.69e-21!165;CL:0000837!6.69e-21!165;CL:0000988!1.63e-19!182;CL:0000738!9.51e-16!140;CL:0002031!4.05e-15!124;CL:0002087!5.04e-15!119;CL:0002393!3.02e-07!9;CL:0002397!3.02e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.15e-44;33!CL:0002057;2.15e-44;33!CL:0000473;1.67e-33;39!CL:0000234;1.67e-33;39!CL:0000576;1.93e-29;48!CL:0000766;6.94e-18;69!CL:0000763;9.12e-10;100!CL:0002087;2.38e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.64e-48,42;CL:0002057,2.64e-48,42;CL:0000473,2.29e-47,48;CL:0000234,2.29e-47,48;CL:0002194,2.50e-37,59;CL:0000576,2.50e-37,59;CL:0000040,2.50e-37,59;CL:0000559,2.50e-37,59;CL:0002009,4.94e-36,61;CL:0000766,4.20e-34,72;CL:0000839,3.94e-33,66;CL:0000557,1.33e-32,67;CL:0000763,1.57e-24,108;CL:0000049,1.57e-24,108;CL:0002087,3.08e-20,115;CL:0000738,7.75e-19,136;CL:0002031,4.87e-17,120;CL:0000037,1.81e-16,168;CL:0000988,1.82e-15,177;CL:0002032,1.89e-15,161;CL:0000837,1.89e-15,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-34;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000029;1.76e-09;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-21!80;UBERON:0001474!4.08e-20!86;UBERON:0002390!7.80e-20!102;UBERON:0003061!7.80e-20!102;UBERON:0002193!1.73e-19!112;UBERON:0004765!1.20e-17!101;UBERON:0001434!1.20e-17!101;UBERON:0002405!3.34e-17!115;UBERON:0002204!1.69e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.76e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.87e-28,76;UBERON:0001474,3.46e-26,82;UBERON:0002405,9.70e-26,93;UBERON:0002193,1.95e-24,108;UBERON:0002390,3.07e-24,98;UBERON:0003061,3.07e-24,98;UBERON:0004765,1.25e-23,90;UBERON:0001434,5.34e-21,100;UBERON:0002204,4.99e-13,167;UBERON:0003081,1.55e-11,203;UBERON:0000029,1.25e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,3.32397245119126,0.601633342410425,2.38711957787437,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0,0.929119112685311,4.31538588483226,2.0492856522328,2.60130452877444,0.344745680736619,0.645484683583826,2.70852973188684,0,0,0,1.22433556948361,0,0,0.659702600373432,1.79517291859469,2.13112375266347,2.32167390902867,0.56738522469114,1.24564449799115,3.26623264833766,0.521482918420201,3.47502151528187,1.21079900526674,1.10483290796269,2.84816148696796,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.649094787309367,0.348259474598534,0.531831842075461,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,1.3940745403212,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.338583555603207,0.1605880751037,0,1.27753871307098,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0.533034776018635,0,0.31396051279005,0.498635045700469,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,2.41981432097328,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,3.32397245119126,0.601633342410425,2.38711957787437,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0,0.929119112685311,4.31538588483226,2.0492856522328,2.60130452877444,0.344745680736619,0.645484683583826,2.70852973188684,0,0,0,1.22433556948361,0,0,0.659702600373432,1.79517291859469,2.13112375266347,2.32167390902867,0.56738522469114,1.24564449799115,3.26623264833766,0.521482918420201,3.47502151528187,1.21079900526674,1.10483290796269,2.84816148696796,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.649094787309367,0.348259474598534,0.531831842075461,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,1.3940745403212,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.338583555603207,0.1605880751037,0,1.27753871307098,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0.533034776018635,0,0.31396051279005,0.498635045700469,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,2.41981432097328,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:43589325..43589328,- | |short_description=p@chr18:43589325..43589328,- | ||
}} | }} |
Latest revision as of 00:59, 26 July 2015
Short description: | p@chr18:43589325..43589328, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:43589325..43589328, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.64e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.64e-48 | 42 |
defensive cell | 2.29e-47 | 48 |
phagocyte | 2.29e-47 | 48 |
monopoietic cell | 2.50e-37 | 59 |
monocyte | 2.50e-37 | 59 |
monoblast | 2.50e-37 | 59 |
promonocyte | 2.50e-37 | 59 |
macrophage dendritic cell progenitor | 4.94e-36 | 61 |
myeloid leukocyte | 4.20e-34 | 72 |
myeloid lineage restricted progenitor cell | 3.94e-33 | 66 |
granulocyte monocyte progenitor cell | 1.33e-32 | 67 |
myeloid cell | 1.57e-24 | 108 |
common myeloid progenitor | 1.57e-24 | 108 |
nongranular leukocyte | 3.08e-20 | 115 |
leukocyte | 7.75e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 4.87e-17 | 120 |
hematopoietic stem cell | 1.81e-16 | 168 |
hematopoietic cell | 1.82e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.89e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-15 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.87e-28 | 76 |
bone element | 3.46e-26 | 82 |
immune system | 9.70e-26 | 93 |
hemolymphoid system | 1.95e-24 | 108 |
hematopoietic system | 3.07e-24 | 98 |
blood island | 3.07e-24 | 98 |
skeletal element | 1.25e-23 | 90 |
skeletal system | 5.34e-21 | 100 |
musculoskeletal system | 4.99e-13 | 167 |
lateral plate mesoderm | 1.55e-11 | 203 |
lymph node | 1.25e-09 | 1 |