FFCP PHASE1:Hg19::chr18:61568968..61568988,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:61568968..61568988,+
|short_description=p@chr18:61568968..61568988,+
|description=CAGE_peak_at_chr18:61568968..61568988,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:61568968..61568988,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr18:61568968..61568988,+ | |||
|id=chr18:61568968..61568988,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.59e-35!42;CL:0000860!1.62e-32!45;CL:0002194!5.75e-25!63;CL:0000576!5.75e-25!63;CL:0000040!5.75e-25!63;CL:0000559!5.75e-25!63;CL:0002009!6.64e-24!65;CL:0000839!1.62e-21!70;CL:0000557!4.42e-21!71;CL:0000766!4.48e-19!76;CL:0000763!9.79e-12!112;CL:0000049!9.79e-12!112;CL:0002087!5.38e-09!119;CL:0002031!2.63e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-66;33!CL:0002057;1.17e-66;33!CL:0000473;4.08e-48;39!CL:0000234;4.08e-48;39!CL:0000576;4.02e-30;48!CL:0000766;1.06e-16;69!CL:0000763;1.03e-11;100!CL:0002087;1.99e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.39e-58,42;CL:0002057,1.39e-58,42;CL:0000473,9.12e-51,48;CL:0000234,9.12e-51,48;CL:0002194,8.07e-40,59;CL:0000576,8.07e-40,59;CL:0000040,8.07e-40,59;CL:0000559,8.07e-40,59;CL:0002009,2.09e-38,61;CL:0000839,3.05e-35,66;CL:0000557,1.15e-34,67;CL:0000766,5.13e-32,72;CL:0000763,4.14e-20,108;CL:0000049,4.14e-20,108;CL:0002087,1.19e-18,115;CL:0002031,1.03e-17,120;CL:0000738,3.59e-15,136;CL:0002032,3.32e-12,161;CL:0000837,3.32e-12,161;CL:0000037,1.56e-11,168;CL:0000988,9.58e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-44;42!CL:0000049;2.01e-07;108 | |||
|ontology_enrichment_disease=DOID:2394!1.65e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2513;7.45e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,8.51e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-17!80;UBERON:0001474!6.72e-17!86;UBERON:0004765!5.28e-15!101;UBERON:0001434!5.28e-15!101;UBERON:0002204!4.97e-12!167;UBERON:0002390!6.65e-12!102;UBERON:0003061!6.65e-12!102;UBERON:0002193!4.47e-10!112;UBERON:0002405!1.35e-09!115;UBERON:0002118!2.37e-09!5;UBERON:0004532!2.37e-09!5;UBERON:0003081!5.37e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.82e-30,76;UBERON:0001474,1.13e-27,82;UBERON:0004765,6.91e-25,90;UBERON:0002405,5.79e-24,93;UBERON:0002390,1.50e-22,98;UBERON:0003061,1.50e-22,98;UBERON:0001434,5.05e-22,100;UBERON:0002193,4.14e-20,108;UBERON:0002204,1.26e-11,167;UBERON:0003081,5.65e-10,203 | |||
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| ||
|short_description=p@chr18:61568968..61568988,+ | |||
}} | }} |
Latest revision as of 01:53, 26 July 2015
Short description: | p@chr18:61568968..61568988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:61568968..61568988, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.39e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-58 | 42 |
defensive cell | 9.12e-51 | 48 |
phagocyte | 9.12e-51 | 48 |
monopoietic cell | 8.07e-40 | 59 |
monocyte | 8.07e-40 | 59 |
monoblast | 8.07e-40 | 59 |
promonocyte | 8.07e-40 | 59 |
macrophage dendritic cell progenitor | 2.09e-38 | 61 |
myeloid lineage restricted progenitor cell | 3.05e-35 | 66 |
granulocyte monocyte progenitor cell | 1.15e-34 | 67 |
myeloid leukocyte | 5.13e-32 | 72 |
myeloid cell | 4.14e-20 | 108 |
common myeloid progenitor | 4.14e-20 | 108 |
nongranular leukocyte | 1.19e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.03e-17 | 120 |
leukocyte | 3.59e-15 | 136 |
hematopoietic oligopotent progenitor cell | 3.32e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.32e-12 | 161 |
hematopoietic stem cell | 1.56e-11 | 168 |
hematopoietic cell | 9.58e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.82e-30 | 76 |
bone element | 1.13e-27 | 82 |
skeletal element | 6.91e-25 | 90 |
immune system | 5.79e-24 | 93 |
hematopoietic system | 1.50e-22 | 98 |
blood island | 1.50e-22 | 98 |
skeletal system | 5.05e-22 | 100 |
hemolymphoid system | 4.14e-20 | 108 |
musculoskeletal system | 1.26e-11 | 167 |
lateral plate mesoderm | 5.65e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 8.51e-08 | 1 |