FFCP PHASE1:Hg19::chr18:7955271..7955280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:7955271..7955280,+ | |||
|coexpression_cluster_id=C184 | |coexpression_cluster_id=C184 | ||
|description=CAGE_peak_at_chr18:7955271..7955280,+ | |description=CAGE_peak_at_chr18:7955271..7955280,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!1.16e-07!6 | |ontology_enrichment_celltype=CL:0000080!1.16e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000167;9.37e-99;1!CL:0000164;9.37e-99;1!CL:0000502;9.37e-99;1!CL:0000172;9.37e-99;1!CL:0000173;9.37e-99;1!CL:0000150;2.19e-12;9!CL:0000163;2.19e-12;9!CL:0000081;2.37e-10;11 | |ontology_enrichment_celltype_v019=CL:0000167;9.37e-99;1!CL:0000164;9.37e-99;1!CL:0000502;9.37e-99;1!CL:0000172;9.37e-99;1!CL:0000173;9.37e-99;1!CL:0000150;2.19e-12;9!CL:0000163;2.19e-12;9!CL:0000081;2.37e-10;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.37e-99,1;CL:0000164,9.37e-99,1;CL:0000502,9.37e-99,1;CL:0000172,9.37e-99,1;CL:0000173,9.37e-99,1;CL:0002351,9.37e-99,1;CL:0000150,2.19e-12,9;CL:0000163,2.19e-12,9;CL:0000081,2.37e-10,11 | |||
|ontology_enrichment_development_v019=CL:0002351;9.37e-99;1 | |ontology_enrichment_development_v019=CL:0002351;9.37e-99;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;9.37e-99;1!DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |ontology_enrichment_disease_v019=DOID:4430;9.37e-99;1!DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,9.37e-99,1;DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001875!4.39e-10!2;UBERON:0006514!4.39e-10!2 | |ontology_enrichment_uberon=UBERON:0001875!4.39e-10!2;UBERON:0006514!4.39e-10!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.02e-11;10!UBERON:0000178;5.93e-08;15!UBERON:0000179;5.93e-08;15!UBERON:0000463;5.93e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0002331;3.02e-11;10!UBERON:0000178;5.93e-08;15!UBERON:0000179;5.93e-08;15!UBERON:0000463;5.93e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10;UBERON:0000178,5.93e-08,15;UBERON:0000179,5.93e-08,15;UBERON:0000463,5.93e-08,15 | |||
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| ||
|short_description=p@chr18:7955271..7955280,+ | |short_description=p@chr18:7955271..7955280,+ | ||
}} | }} |
Latest revision as of 02:33, 26 July 2015
Short description: | p@chr18:7955271..7955280, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:7955271..7955280, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.37e-99 | 1 |
enteroendocrine cell | 9.37e-99 | 1 |
type D enteroendocrine cell | 9.37e-99 | 1 |
somatostatin secreting cell | 9.37e-99 | 1 |
pancreatic D cell | 9.37e-99 | 1 |
progenitor cell of endocrine pancreas | 9.37e-99 | 1 |
glandular epithelial cell | 2.19e-12 | 9 |
endocrine cell | 2.19e-12 | 9 |
blood cell | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.02e-11 | 10 |
blastocyst | 3.02e-11 | 10 |
blastula | 3.02e-11 | 10 |
bilaminar disc | 3.02e-11 | 10 |
inner cell mass | 3.02e-11 | 10 |
cleaving embryo | 3.02e-11 | 10 |
connecting stalk | 3.02e-11 | 10 |
inner cell mass derived epiblast | 3.02e-11 | 10 |
extraembryonic mesoderm | 3.02e-11 | 10 |
blood | 5.93e-08 | 15 |
haemolymphatic fluid | 5.93e-08 | 15 |
organism substance | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.37e-99 | 1 |
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |