FFCP PHASE1:Hg19::chr19:1470631..1470648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1470631..1470648,- | |||
|description=CAGE_peak_at_chr19:1470631..1470648,- | |description=CAGE_peak_at_chr19:1470631..1470648,- | ||
|id=chr19:1470631..1470648,- | |id=chr19:1470631..1470648,- | ||
|ontology_enrichment_celltype=CL:0002076!9.07e-15!43;CL:0002368!1.14e-13!13;CL:0000223!2.07e-09!59;CL:0002150!1.08e-08!3;CL:0000861!1.08e-08!3;CL:0000066!1.81e-08!254;CL:0002328!4.84e-08!3;CL:0002231!2.42e-07!3 | |ontology_enrichment_celltype=CL:0002076!9.07e-15!43;CL:0002368!1.14e-13!13;CL:0000223!2.07e-09!59;CL:0002150!1.08e-08!3;CL:0000861!1.08e-08!3;CL:0000066!1.81e-08!254;CL:0002328!4.84e-08!3;CL:0002231!2.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;9.87e-34;4!CL:0002222;9.87e-34;4!CL:0002224;9.87e-34;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,8.36e-34,4;CL:0002222,8.36e-34,4;CL:0002224,8.36e-34,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.59e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!4.84e-08!3;UBERON:0002031!4.84e-08!3;UBERON:0001896!5.00e-07!3;UBERON:0005290!5.00e-07!3;UBERON:0010096!5.00e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;9.87e-34;4!UBERON:0005389;9.87e-34;4!UBERON:0000484;9.87e-34;4!UBERON:0000965;9.87e-34;4!UBERON:0001803;9.87e-34;4!UBERON:0000019;2.39e-16;19!UBERON:0000047;2.39e-16;19!UBERON:0004088;2.39e-16;19!UBERON:0010230;2.39e-16;19!UBERON:0000970;1.43e-15;20!UBERON:0002104;7.18e-15;21!UBERON:0001456;7.18e-15;21!UBERON:0000020;1.20e-13;23!UBERON:0001032;4.11e-13;24!UBERON:0004456;4.11e-13;24!UBERON:0007625;5.42e-13;11!UBERON:0001801;1.99e-10;14!UBERON:0000966;6.55e-08;5!UBERON:0005388;6.55e-08;5!UBERON:0001802;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,8.36e-34,4;UBERON:0005389,8.36e-34,4;UBERON:0000484,8.36e-34,4;UBERON:0002546,8.36e-34,4;UBERON:0000965,8.36e-34,4;UBERON:0001803,8.36e-34,4;UBERON:0003073,8.36e-34,4;UBERON:0005426,8.36e-34,4;UBERON:0000076,1.71e-17,8;UBERON:0000019,1.29e-15,20;UBERON:0000047,1.29e-15,20;UBERON:0010312,1.29e-15,20;UBERON:0004088,1.29e-15,20;UBERON:0010230,1.29e-15,20;UBERON:0003072,1.29e-15,20;UBERON:0004128,1.29e-15,20;UBERON:0003071,1.29e-15,20;UBERON:0000970,6.53e-15,21;UBERON:0002104,6.53e-15,21;UBERON:0001456,2.85e-14,22;UBERON:0000020,3.78e-13,24;UBERON:0001032,3.78e-13,24;UBERON:0004456,3.78e-13,24;UBERON:0007625,5.10e-13,11;UBERON:0001801,1.90e-10,14;UBERON:0005085,2.36e-10,31;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6;UBERON:0001444,8.40e-07,49 | |||
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| ||
|short_description=p@chr19:1470631..1470648,- | |short_description=p@chr19:1470631..1470648,- | ||
}} | }} |
Latest revision as of 04:26, 26 July 2015
Short description: | p@chr19:1470631..1470648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1470631..1470648, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 8.36e-34 | 4 |
vertebrate lens cell | 8.36e-34 | 4 |
lens epithelial cell | 8.36e-34 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 8.36e-34 | 4 |
transparent eye structure | 8.36e-34 | 4 |
simple cuboidal epithelium | 8.36e-34 | 4 |
cranial placode | 8.36e-34 | 4 |
lens of camera-type eye | 8.36e-34 | 4 |
epithelium of lens | 8.36e-34 | 4 |
lens placode | 8.36e-34 | 4 |
lens vesicle | 8.36e-34 | 4 |
external ectoderm | 1.71e-17 | 8 |
camera-type eye | 1.29e-15 | 20 |
simple eye | 1.29e-15 | 20 |
immature eye | 1.29e-15 | 20 |
ocular region | 1.29e-15 | 20 |
eyeball of camera-type eye | 1.29e-15 | 20 |
optic cup | 1.29e-15 | 20 |
optic vesicle | 1.29e-15 | 20 |
eye primordium | 1.29e-15 | 20 |
eye | 6.53e-15 | 21 |
visual system | 6.53e-15 | 21 |
face | 2.85e-14 | 22 |
sense organ | 3.78e-13 | 24 |
sensory system | 3.78e-13 | 24 |
entire sense organ system | 3.78e-13 | 24 |
pigment epithelium of eye | 5.10e-13 | 11 |
anterior segment of eyeball | 1.90e-10 | 14 |
ectodermal placode | 2.36e-10 | 31 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
subdivision of head | 8.40e-07 | 49 |