FFCP PHASE1:Hg19::chr19:20230445..20230450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:20230445..20230450,+ | |||
|coexpression_cluster_id=C1240 | |||
|description=CAGE_peak_at_chr19:20230445..20230450,+ | |description=CAGE_peak_at_chr19:20230445..20230450,+ | ||
|id=chr19:20230445..20230450,+ | |id=chr19:20230445..20230450,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.09e-08!5;CL:0000540!7.75e-07!6;CL:0000031!7.75e-07!6;CL:0000404!7.75e-07!6;CL:0002319!7.97e-07!25 | |ontology_enrichment_celltype=CL:0002322!1.09e-08!5;CL:0000540!7.75e-07!6;CL:0000031!7.75e-07!6;CL:0000404!7.75e-07!6;CL:0002319!7.97e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002591;2.37e-29;1!CL:0000039;3.15e-17;7!CL:0000586;3.15e-17;7!CL:0002322;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.16e-29,1;CL:0000039,2.67e-17,7;CL:0000586,2.67e-17,7;CL:0002322,5.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.98e-30;1!UBERON:0007297;1.33e-15;2!UBERON:0009117;2.24e-12;10!UBERON:0005564;2.24e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.90e-08!8;UBERON:0003135!7.18e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.42e-32;8!UBERON:0000998;9.98e-30;1!UBERON:0006868;9.98e-30;1!UBERON:0003135;6.11e-24;11!UBERON:0000078;2.05e-15;2!UBERON:0002012;2.05e-15;2!UBERON:0008886;2.05e-15;2!UBERON:0000991;6.31e-13;21!UBERON:0003101;2.26e-12;22!UBERON:0000079;2.26e-12;22!UBERON:0006947;7.42e-11;3!UBERON:0004054;7.42e-11;3!UBERON:0005904;1.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.15e-32,8;UBERON:0000998,9.99e-30,1;UBERON:0006868,9.99e-30,1;UBERON:0003135,5.23e-24,11;UBERON:0000078,2.37e-15,2;UBERON:0007497,2.37e-15,2;UBERON:0003643,2.37e-15,2;UBERON:0003504,2.37e-15,2;UBERON:0003469,2.37e-15,2;UBERON:0003496,2.37e-15,2;UBERON:0002012,2.37e-15,2;UBERON:0008886,2.37e-15,2;UBERON:0007303,2.37e-15,2;UBERON:0002061,2.37e-15,2;UBERON:0005432,2.37e-15,2;UBERON:0004363,2.37e-15,2;UBERON:0000991,5.82e-13,21;UBERON:0009196,5.82e-13,21;UBERON:0009117,5.82e-13,21;UBERON:0005564,5.82e-13,21;UBERON:0004176,2.09e-12,22;UBERON:0003101,2.09e-12,22;UBERON:0000079,2.09e-12,22;UBERON:0006947,7.42e-11,3;UBERON:0004054,7.42e-11,3;UBERON:0004145,1.09e-10,3;UBERON:0005904,1.82e-08,4;UBERON:0003498,6.39e-07,5;UBERON:0005985,6.39e-07,5 | |||
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| ||
|short_description=p@chr19:20230445..20230450,+ | |short_description=p@chr19:20230445..20230450,+ | ||
}} | }} |
Latest revision as of 05:35, 26 July 2015
Short description: | p@chr19:20230445..20230450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:20230445..20230450, + |
Coexpression cluster: | C1240_testicular_iPS_HES3GFP_H9_teratocarcinoma_non_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.16e-29 | 1 |
germ line cell | 2.67e-17 | 7 |
germ cell | 2.67e-17 | 7 |
embryonic stem cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.15e-32 | 8 |
seminal vesicle | 9.99e-30 | 1 |
seminal fluid secreting gland | 9.99e-30 | 1 |
male reproductive organ | 5.23e-24 | 11 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.37e-15 | 2 |
developing epithelial placode | 2.37e-15 | 2 |
respiratory system arterial blood vessel | 2.37e-15 | 2 |
respiratory system blood vessel | 2.37e-15 | 2 |
respiratory system artery | 2.37e-15 | 2 |
head blood vessel | 2.37e-15 | 2 |
pulmonary artery | 2.37e-15 | 2 |
pulmonary vascular system | 2.37e-15 | 2 |
pharyngeal vasculature | 2.37e-15 | 2 |
truncus arteriosus | 2.37e-15 | 2 |
aortic sac | 2.37e-15 | 2 |
pharyngeal arch artery | 2.37e-15 | 2 |
gonad | 5.82e-13 | 21 |
indifferent external genitalia | 5.82e-13 | 21 |
indifferent gonad | 5.82e-13 | 21 |
gonad primordium | 5.82e-13 | 21 |
external genitalia | 2.09e-12 | 22 |
male organism | 2.09e-12 | 22 |
male reproductive system | 2.09e-12 | 22 |
male genital duct | 7.42e-11 | 3 |
internal male genitalia | 7.42e-11 | 3 |
outflow tract | 1.09e-10 | 3 |
duct of male reproductive system | 1.82e-08 | 4 |
heart blood vessel | 6.39e-07 | 5 |
coronary vessel | 6.39e-07 | 5 |