FFCP PHASE1:Hg19::chr19:35492016..35492027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:35492016..35492027,+ | |||
|coexpression_cluster_id=C205 | |coexpression_cluster_id=C205 | ||
|description=CAGE_peak_at_chr19:35492016..35492027,+ | |description=CAGE_peak_at_chr19:35492016..35492027,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!9.16e-08!5;CL:0000080!3.83e-07!6 | |ontology_enrichment_celltype=CL:0000453!9.16e-08!5;CL:0000080!3.83e-07!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.88e-50;1!DOID:0060061;1.88e-50;1!DOID:8691;1.88e-50;1 | |ontology_enrichment_disease_v019=DOID:0060060;1.88e-50;1!DOID:0060061;1.88e-50;1!DOID:8691;1.88e-50;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.46e-50,1;DOID:0060061,1.46e-50,1;DOID:8691,1.46e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.52e-08!8 | |ontology_enrichment_uberon=UBERON:0000473!3.52e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.08e-45;10!UBERON:0000178;2.33e-30;15!UBERON:0000179;2.33e-30;15!UBERON:0000463;2.33e-30;15!UBERON:0000478;2.20e-19;24!UBERON:0002390;6.65e-15;32!UBERON:0000922;1.02e-09;49!UBERON:0002193;7.72e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0002331;6.08e-45;10!UBERON:0000178;2.33e-30;15!UBERON:0000179;2.33e-30;15!UBERON:0000463;2.33e-30;15!UBERON:0000478;2.20e-19;24!UBERON:0002390;6.65e-15;32!UBERON:0000922;1.02e-09;49!UBERON:0002193;7.72e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.56e-45,10;UBERON:0000358,6.56e-45,10;UBERON:0000307,6.56e-45,10;UBERON:0000091,6.56e-45,10;UBERON:0000087,6.56e-45,10;UBERON:0007010,6.56e-45,10;UBERON:0007806,6.56e-45,10;UBERON:0008780,6.56e-45,10;UBERON:0005728,6.56e-45,10;UBERON:0000178,2.45e-30,15;UBERON:0000179,2.45e-30,15;UBERON:0000463,2.45e-30,15;UBERON:0000478,2.27e-19,24 | |||
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|short_description=p@chr19:35492016..35492027,+ | |short_description=p@chr19:35492016..35492027,+ | ||
}} | }} |
Latest revision as of 06:28, 26 July 2015
Short description: | p@chr19:35492016..35492027, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35492016..35492027, + |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.56e-45 | 10 |
blastocyst | 6.56e-45 | 10 |
blastula | 6.56e-45 | 10 |
bilaminar disc | 6.56e-45 | 10 |
inner cell mass | 6.56e-45 | 10 |
cleaving embryo | 6.56e-45 | 10 |
connecting stalk | 6.56e-45 | 10 |
inner cell mass derived epiblast | 6.56e-45 | 10 |
extraembryonic mesoderm | 6.56e-45 | 10 |
blood | 2.45e-30 | 15 |
haemolymphatic fluid | 2.45e-30 | 15 |
organism substance | 2.45e-30 | 15 |
extraembryonic structure | 2.27e-19 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.46e-50 | 1 |
cutaneous T cell lymphoma | 1.46e-50 | 1 |
mycosis fungoides | 1.46e-50 | 1 |