FFCP PHASE1:Hg19::chr19:39898470..39898488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39898470..39898488,+ | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_at_chr19:39898470..39898488,+ | |description=CAGE_peak_at_chr19:39898470..39898488,+ | ||
|id=chr19:39898470..39898488,+ | |id=chr19:39898470..39898488,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.71e-26!42;CL:0000860!1.05e-24!45;CL:0000766!2.92e-24!76;CL:0000738!4.48e-24!140;CL:0000557!1.58e-19!71;CL:0002009!2.86e-19!65;CL:0002194!5.53e-18!63;CL:0000576!5.53e-18!63;CL:0000040!5.53e-18!63;CL:0000559!5.53e-18!63;CL:0000839!1.13e-17!70;CL:0002031!4.69e-17!124;CL:0002087!7.88e-17!119;CL:0000037!1.30e-14!172;CL:0000566!1.30e-14!172;CL:0002032!1.67e-13!165;CL:0000837!1.67e-13!165;CL:0000763!3.41e-13!112;CL:0000049!3.41e-13!112;CL:0000988!2.30e-12!182;CL:0000094!1.30e-07!8 | |ontology_enrichment_celltype=CL:0002057!2.71e-26!42;CL:0000860!1.05e-24!45;CL:0000766!2.92e-24!76;CL:0000738!4.48e-24!140;CL:0000557!1.58e-19!71;CL:0002009!2.86e-19!65;CL:0002194!5.53e-18!63;CL:0000576!5.53e-18!63;CL:0000040!5.53e-18!63;CL:0000559!5.53e-18!63;CL:0000839!1.13e-17!70;CL:0002031!4.69e-17!124;CL:0002087!7.88e-17!119;CL:0000037!1.30e-14!172;CL:0000566!1.30e-14!172;CL:0002032!1.67e-13!165;CL:0000837!1.67e-13!165;CL:0000763!3.41e-13!112;CL:0000049!3.41e-13!112;CL:0000988!2.30e-12!182;CL:0000094!1.30e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-32;33!CL:0002057;1.21e-32;33!CL:0000473;5.23e-23;39!CL:0000234;5.23e-23;39!CL:0000576;4.14e-21;48!CL:0000766;6.87e-19;69!CL:0000094;4.64e-14;8!CL:0000081;1.07e-09;11!CL:0002087;2.01e-09;104!CL:0000763;1.90e-08;100!CL:0000738;1.96e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.81e-41,72;CL:0000860,1.89e-40,42;CL:0002057,1.89e-40,42;CL:0000473,8.34e-36,48;CL:0000234,8.34e-36,48;CL:0000738,2.06e-35,136;CL:0000557,1.39e-32,67;CL:0002009,1.97e-30,61;CL:0000839,2.01e-29,66;CL:0002194,6.42e-28,59;CL:0000576,6.42e-28,59;CL:0000040,6.42e-28,59;CL:0000559,6.42e-28,59;CL:0000763,1.63e-26,108;CL:0000049,1.63e-26,108;CL:0002031,6.84e-26,120;CL:0000037,6.59e-25,168;CL:0002032,1.77e-24,161;CL:0000837,1.77e-24,161;CL:0002087,2.27e-23,115;CL:0000988,1.16e-22,177;CL:0000094,4.37e-14,8;CL:0000081,1.03e-09,11;CL:0000134,2.73e-07,354;CL:0002320,8.14e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-28;42!CL:0000049;1.08e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.28e-18!80;UBERON:0002390!1.93e-16!102;UBERON:0003061!1.93e-16!102;UBERON:0007023!2.19e-16!115;UBERON:0001474!6.28e-16!86;UBERON:0002193!3.86e-15!112;UBERON:0002405!7.72e-15!115;UBERON:0004765!2.07e-13!101;UBERON:0001434!2.07e-13!101;UBERON:0002204!5.57e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!5.28e-18!80;UBERON:0002390!1.93e-16!102;UBERON:0003061!1.93e-16!102;UBERON:0007023!2.19e-16!115;UBERON:0001474!6.28e-16!86;UBERON:0002193!3.86e-15!112;UBERON:0002405!7.72e-15!115;UBERON:0004765!2.07e-13!101;UBERON:0001434!2.07e-13!101;UBERON:0002204!5.57e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.63e-27,76;UBERON:0001474,1.77e-25,82;UBERON:0004765,4.79e-22,90;UBERON:0002390,9.14e-22,98;UBERON:0003061,9.14e-22,98;UBERON:0002405,5.35e-21,93;UBERON:0001434,1.17e-19,100;UBERON:0002193,1.53e-19,108;UBERON:0002204,1.34e-10,167;UBERON:0003081,1.29e-07,203;UBERON:0007023,1.79e-07,114 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,6.68719270643137,3.0706351847777,4.64448369948228,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,4.43196326825502,10.4283112684474,9.54847831149748,0.895661896959697,0.32389366601898,0.515151135268373,1.16318591023652,0.377875943688809,1.21292030593908,1.39457422143411,2.05583944010913,1.54853185447552,7.76769459269806,3.33008918487831,2.83778675866302,6.89491361473237,10.973239620925,16.251178391321,1.69418105588344,1.91034305040492,2.47195832889593,5.20342617030534,6.41858054152187,8.31138263538754,2.96866170168044,2.59302754908121,0.426224750532694,0.870627715885752,5.10646702222026,2.4912889959823,3.51748131359441,2.08593167368081,4.56096573880745,1.21079900526674,1.10483290796269,2.21523671208619,0.845021145247767,3.18906449947565,0.838634582033504,1.46027220490444,1.50176892841506,2.73233497385036,0.570025487482497,1.39241674039363,1.27864907635244,0,0,0,0,0.800791974072025,0.574752439954483,0,0.954053754535364,3.98449078376614,3.52342313622563,7.64546456250458,1.32171328579026,2.80254281490768,0,2.16380747125216,5.89516144123747,5.96244347098577,0.334372990781356,0,0.473447805734733,3.89653456815823,0.445641827540694,0.883817722424512,0,0.541607727530031,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.444859689486181,0,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.127986611154418,0,0,0,3.02410114837099,5.08136371988664,3.62061009706997,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0.370784442784429,0.324547393654683,0,0.132957960518865,1.66943437013739,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,1.96565443335525,2.36315962672562,0,0,0,0.109750285408626,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,45.8195135345106,33.8681890529859,24.9960018184232,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,2.75843064282698,4.31255149719035,3.20857590699371,0,0,0,0,0.637938751653163,5.99205619157746,5.9832291840805,7.45947924184864,0.49076596687656,0,0.271265023699736,0,0.356857977594324,0,0,0.601892199455438,0,1.03473071292505,0,0,0.173767228936166,0,0,0.82707210449155,3.66714141391649,5.76328812138599,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,1.30012049207304,0,0,0,0,0.275673144969061,0,0.290033387828457,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,1.31178950409327,0,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,1.89996871767898,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,1.88287601553558,0,1.68471475667626,0.443430153536676,0,0,0,0,0.238231775457789,0.411362273086194,0,1.08006287447623,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,2.05111450980652,0,0,0,0.23874448473769,0,0.614321404198464,0,0.281338832821026,0.111308705022906,0.16480387422676,0,3.98495976502139,8.56480138146558,0,0,0,0,0.0898683511473268,0,0.511572370226872,2.76201535783414,0,0,0,0.463840490809256,0,0,0.174919999992391,2.89999830173917,0.1137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.658156191461918,0,0.41827123283581,1.00035336054936,0,0,0,0,0.957003479195758,0.274792780205587,1.06606955203727,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,4.0690479671536,10.9985426088053,0,0,0,0.404406797884062,1.60515529459758,0,0,0,0,0.394584402849391,0,0,1.01098527405581,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.261177619741208,1.39781334593624,0.171986032471617,0.0967563312890851,0,0.0821154570532092,3.68558262655994,0,1.35588444468319,0.137041924646751,0,0,0,0,5.12287187374446,0.39961921916426,0.288180834308212,0,0,0,0.124252535565433,0.47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| ||
|short_description=p@chr19:39898470..39898488,+ | |short_description=p@chr19:39898470..39898488,+ | ||
}} | }} |
Latest revision as of 07:36, 26 July 2015
Short description: | p@chr19:39898470..39898488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39898470..39898488, + |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.81e-41 | 72 |
classical monocyte | 1.89e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-40 | 42 |
defensive cell | 8.34e-36 | 48 |
phagocyte | 8.34e-36 | 48 |
leukocyte | 2.06e-35 | 136 |
granulocyte monocyte progenitor cell | 1.39e-32 | 67 |
macrophage dendritic cell progenitor | 1.97e-30 | 61 |
myeloid lineage restricted progenitor cell | 2.01e-29 | 66 |
monopoietic cell | 6.42e-28 | 59 |
monocyte | 6.42e-28 | 59 |
monoblast | 6.42e-28 | 59 |
promonocyte | 6.42e-28 | 59 |
myeloid cell | 1.63e-26 | 108 |
common myeloid progenitor | 1.63e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 6.84e-26 | 120 |
hematopoietic stem cell | 6.59e-25 | 168 |
hematopoietic oligopotent progenitor cell | 1.77e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-24 | 161 |
nongranular leukocyte | 2.27e-23 | 115 |
hematopoietic cell | 1.16e-22 | 177 |
granulocyte | 4.37e-14 | 8 |
blood cell | 1.03e-09 | 11 |
mesenchymal cell | 2.73e-07 | 354 |
connective tissue cell | 8.14e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.63e-27 | 76 |
bone element | 1.77e-25 | 82 |
skeletal element | 4.79e-22 | 90 |
hematopoietic system | 9.14e-22 | 98 |
blood island | 9.14e-22 | 98 |
immune system | 5.35e-21 | 93 |
skeletal system | 1.17e-19 | 100 |
hemolymphoid system | 1.53e-19 | 108 |
musculoskeletal system | 1.34e-10 | 167 |
lateral plate mesoderm | 1.29e-07 | 203 |
adult organism | 1.79e-07 | 114 |