FFCP PHASE1:Hg19::chr19:46145696..46145710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_AK024984_5end | |association_with_transcript=-6bp_to_AK024984_5end | ||
|cluster_id=chr19:46145696..46145710,- | |||
|description=CAGE_peak_6_at_AK024984_5end | |description=CAGE_peak_6_at_AK024984_5end | ||
|id=chr19:46145696..46145710,- | |id=chr19:46145696..46145710,- | ||
|ontology_enrichment_celltype=CL:0000542!4.41e-24!53;CL:0000051!4.41e-24!53;CL:0000838!4.85e-23!52;CL:0000988!1.10e-19!182;CL:0002032!3.24e-19!165;CL:0000837!3.24e-19!165;CL:0000037!3.74e-19!172;CL:0000566!3.74e-19!172;CL:0000738!4.56e-17!140;CL:0002087!5.96e-17!119;CL:0002031!2.00e-15!124;CL:0000945!4.51e-15!24;CL:0000826!4.51e-15!24;CL:0000084!3.30e-10!25;CL:0000827!3.30e-10!25;CL:0000791!7.32e-07!18;CL:0000789!7.32e-07!18;CL:0002420!7.32e-07!18;CL:0002419!7.32e-07!18;CL:0000790!7.32e-07!18 | |ontology_enrichment_celltype=CL:0000542!4.41e-24!53;CL:0000051!4.41e-24!53;CL:0000838!4.85e-23!52;CL:0000988!1.10e-19!182;CL:0002032!3.24e-19!165;CL:0000837!3.24e-19!165;CL:0000037!3.74e-19!172;CL:0000566!3.74e-19!172;CL:0000738!4.56e-17!140;CL:0002087!5.96e-17!119;CL:0002031!2.00e-15!124;CL:0000945!4.51e-15!24;CL:0000826!4.51e-15!24;CL:0000084!3.30e-10!25;CL:0000827!3.30e-10!25;CL:0000791!7.32e-07!18;CL:0000789!7.32e-07!18;CL:0002420!7.32e-07!18;CL:0002419!7.32e-07!18;CL:0000790!7.32e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.27e-34;24!CL:0000542;4.92e-13;53!CL:0000946;3.39e-10;1!CL:0000786;3.39e-10;1!CL:0002032;7.54e-10;1!CL:0000557;7.54e-10;1 | |ontology_enrichment_celltype_v019=CL:0000945;1.27e-34;24!CL:0000542;4.92e-13;53!CL:0000946;3.39e-10;1!CL:0000786;3.39e-10;1!CL:0002032;7.54e-10;1!CL:0000557;7.54e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.91e-35,24;CL:0000826,9.91e-35,24;CL:0000838,4.90e-26,52;CL:0000542,1.67e-25,53;CL:0000051,1.67e-25,53;CL:0000988,2.63e-11,177;CL:0002087,1.81e-10,115;CL:0000946,3.71e-10,1;CL:0000786,3.71e-10,1;CL:0000980,3.71e-10,1;CL:0002031,6.06e-10,120;CL:0000738,1.59e-08,136;CL:0002032,4.24e-08,161;CL:0000837,4.24e-08,161;CL:0000037,1.16e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;4.92e-13;53 | |ontology_enrichment_development_v019=CL:0000051;4.92e-13;53 | ||
|ontology_enrichment_disease=DOID:0060058!3.47e-10!10;DOID:2531!5.57e-10!51;DOID:0060083!5.57e-10!51 | |ontology_enrichment_disease=DOID:0060058!3.47e-10!10;DOID:2531!5.57e-10!51;DOID:0060083!5.57e-10!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.02e-21;10!DOID:4960;1.98e-10;1!DOID:0070004;1.98e-10;1!DOID:630;7.54e-10;1!DOID:0050177;7.54e-10;1!DOID:0060060;7.54e-10;1!DOID:0060061;7.54e-10;1!DOID:0050427;7.54e-10;1!DOID:8691;7.54e-10;1!DOID:2355;7.54e-10;1 | |ontology_enrichment_disease_v019=DOID:0060058;1.02e-21;10!DOID:4960;1.98e-10;1!DOID:0070004;1.98e-10;1!DOID:630;7.54e-10;1!DOID:0050177;7.54e-10;1!DOID:0060060;7.54e-10;1!DOID:0060061;7.54e-10;1!DOID:0050427;7.54e-10;1!DOID:8691;7.54e-10;1!DOID:2355;7.54e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.23e-22,10;DOID:4960,2.37e-10,1;DOID:0070004,2.37e-10,1;DOID:0060060,4.85e-10,1;DOID:0060061,4.85e-10,1;DOID:8691,4.85e-10,1;DOID:630,5.30e-10,1;DOID:0050177,5.30e-10,1;DOID:0050427,5.30e-10,1;DOID:2355,7.55e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.33e-07!7 | |ontology_enrichment_uberon=UBERON:0004177!9.33e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.04e-12;32!UBERON:0000178;8.22e-10;15!UBERON:0000179;8.22e-10;15!UBERON:0000463;8.22e-10;15!UBERON:0002331;1.03e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0002390;4.04e-12;32!UBERON:0000178;8.22e-10;15!UBERON:0000179;8.22e-10;15!UBERON:0000463;8.22e-10;15!UBERON:0002331;1.03e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.61e-10,15;UBERON:0000179,8.61e-10,15;UBERON:0000463,8.61e-10,15;UBERON:0002331,1.03e-08,10;UBERON:0000358,1.03e-08,10;UBERON:0000307,1.03e-08,10;UBERON:0000091,1.03e-08,10;UBERON:0000087,1.03e-08,10;UBERON:0007010,1.03e-08,10;UBERON:0007806,1.03e-08,10;UBERON:0008780,1.03e-08,10;UBERON:0005728,1.03e-08,10 | |||
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| ||
|short_description=p6@AK024984 | |short_description=p6@AK024984 | ||
}} | }} |
Latest revision as of 15:07, 27 July 2015
Short description: | p6@AK024984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AK024984_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_AK024984_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.91e-35 | 24 |
pro-B cell | 9.91e-35 | 24 |
lymphoid lineage restricted progenitor cell | 4.90e-26 | 52 |
lymphocyte | 1.67e-25 | 53 |
common lymphoid progenitor | 1.67e-25 | 53 |
hematopoietic cell | 2.63e-11 | 177 |
nongranular leukocyte | 1.81e-10 | 115 |
antibody secreting cell | 3.71e-10 | 1 |
plasma cell | 3.71e-10 | 1 |
plasmablast | 3.71e-10 | 1 |
hematopoietic lineage restricted progenitor cell | 6.06e-10 | 120 |
leukocyte | 1.59e-08 | 136 |
hematopoietic oligopotent progenitor cell | 4.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.24e-08 | 161 |
hematopoietic stem cell | 1.16e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 8.61e-10 | 15 |
haemolymphatic fluid | 8.61e-10 | 15 |
organism substance | 8.61e-10 | 15 |
umbilical cord | 1.03e-08 | 10 |
blastocyst | 1.03e-08 | 10 |
blastula | 1.03e-08 | 10 |
bilaminar disc | 1.03e-08 | 10 |
inner cell mass | 1.03e-08 | 10 |
cleaving embryo | 1.03e-08 | 10 |
connecting stalk | 1.03e-08 | 10 |
inner cell mass derived epiblast | 1.03e-08 | 10 |
extraembryonic mesoderm | 1.03e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.23e-22 | 10 |
bone marrow cancer | 2.37e-10 | 1 |
myeloma | 2.37e-10 | 1 |
non-Hodgkin lymphoma | 4.85e-10 | 1 |
cutaneous T cell lymphoma | 4.85e-10 | 1 |
mycosis fungoides | 4.85e-10 | 1 |
genetic disease | 5.30e-10 | 1 |
monogenic disease | 5.30e-10 | 1 |
xeroderma pigmentosum | 5.30e-10 | 1 |
anemia | 7.55e-10 | 1 |